RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 RPGRIP1Q96KN7 1286 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 GCOM2Q9BZD3 368 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 ARHGAP39Q9C0H5 1083 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 DOCK5Q9H7D0 1870 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 FAM49BQ9NUQ9 324 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 DNAJC17Q9NVM6 304 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 SART1O43290 800 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 VNN1O95497 513 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 C22orf31O95567 290 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 C4BPAP04003 597 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 MMP3P08254 477 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 RFX1P22670 979 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 CTNNA2P26232 953 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 RGS7P49802 495 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 SLC26A2P50443 739 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 MTHFD1LQ6UB35 978 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 RHOT2Q8IXI1 618 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 OR6B3Q8NGW1 331 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 SPC25Q9HBM1 224 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 STIM2Q9P246 746 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 IGKV6D-21A0A0A0MT36 114 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 TLR3O15455 904 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 TREHO43280 583 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 RAD51CO43502 376 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 GLI1P08151 1106 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 ELNP15502 786 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 CHRNB2P17787 502 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 MCM3P25205 808 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 DYNLT1P63172 113 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 KIF22Q14807 665 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 PPP1R7Q15435 360 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 CDO1Q16878 200 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 DPY19L2P1Q6NXN4 242 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 IFT20Q8IY31 132 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 PPTC7Q8NI37 304 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 AFAP1L1Q8TED9 768 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 TRIM51Q9BSJ1 452 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 TMEM134Q9H6X4 195 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 FBXL5Q9UKA1 691 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 PCDHGC5Q9Y5F6 944 aa9.98□□□□□ -0.81
NUDCD3-203ENST00000460110 SYNJ2BP-COX16A0A087WUM0 186 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 TTI1O43156 1089 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ADCY6O43306 1168 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 TRPA1O75762 1119 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ABCD1P33897 745 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 TMEM132DQ14C87 1099 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 SGSM1Q2NKQ1 1148 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 KCTD16Q68DU8 428 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 SCYL2Q6P3W7 929 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 GSTA5Q7RTV2 222 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ERICH1Q86X53 443 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 EFCAB13Q8IY85 973 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 UBLCP1Q8WVY7 318 aaPredicted RBP9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 C1orf54Q8WWF1 131 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ZNF606Q8WXB4 792 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 FBXL18Q96ME1 805 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 FLRT1Q9NZU1 646 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 COX16Q9P0S2 106 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 PCSK1NQ9UHG2 260 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ATAD5Q96QE3 1844 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 TLDC2A0PJX2 215 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 MANSC4A6NHS7 340 aaPredicted RBP9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ZBTB42B2RXF5 422 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ASAP2O43150 1006 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 SMIM10L2AP0DMW4 78 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 SMIM10L2BP0DMW5 78 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ZBTB48P10074 688 aaPredicted RBP9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 LMAN1P49257 510 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 FAM182AQ5T1J6 154 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 NIF3L1Q9GZT8 377 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 INPP5FQ9Y2H2 1132 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 NR2E1Q9Y466 385 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 M0QZ92 97 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 FLT3LGP49771 235 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 FKBP1BP68106 108 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 PAN2Q504Q3 1202 aaKnown RBP9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 IQSEC1Q6DN90 963 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 DNAJC24Q6P3W2 148 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 USP38Q8NB14 1042 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 ALG3Q92685 438 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 HPDLQ96IR7 371 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.97□□□□□ -0.811e-6■□□□□ 9.8
NUDCD3-203ENST00000460110 SMYD3Q9H7B4 428 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 CACNG4Q9UBN1 327 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 SNX24Q9Y343 169 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 DOCK3Q8IZD9 2030 aa9.97□□□□□ -0.81
NUDCD3-203ENST00000460110 DAPK3O43293 454 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 TBXAS1P24557 533 aaPredicted RBP9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 RGS2P41220 211 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 PLTPP55058 493 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 MBTD1Q05BQ5 628 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 MFSD10Q14728 455 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 ACAD10Q6JQN1 1059 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 SAPCD2Q86UD0 394 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 CCDC26Q8TAB7 109 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 PBKQ96KB5 322 aa9.96□□□□□ -0.81
NUDCD3-203ENST00000460110 C16orf70Q9BSU1 422 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms