RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 BMP7P18075 431 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 CNR2P34972 360 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 CASP5P51878 434 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 ZNF543Q08ER8 600 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 KIF22Q14807 665 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 UTP14CQ5TAP6 766 aaKnown RBP6.72□□□□□ -1.33
CCDC50-203ENST00000460064 EMC10Q5UCC4 262 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 EFCAB12Q6NXP0 572 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 XRRA1Q6P2D8 792 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 DOK3Q7L591 496 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 APBB1IPQ7Z5R6 666 aaPredicted RBP6.72□□□□□ -1.33
CCDC50-203ENST00000460064 SESTD1Q86VW0 696 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 VPS37AQ8NEZ2 397 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 OR6B3Q8NGW1 331 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 LSM14BQ9BX40 385 aaKnown RBP6.72□□□□□ -1.33
CCDC50-203ENST00000460064 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.72□□□□□ -1.33
CCDC50-203ENST00000460064 FBXO34Q9NWN3 711 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 JKAMPQ9P055 326 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 POGKQ9P215 609 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 HECAQ9UBI9 543 aaPredicted RBP6.72□□□□□ -1.33
CCDC50-203ENST00000460064 POM121BA6NF01 834 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 RASA4BC9J798 803 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 BTN3A1O00481 513 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 RASA4O43374 803 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 HAUS5O94927 633 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 INHBBP09529 407 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 EN2P19622 333 aaPredicted RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 SLC6A4P31645 630 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 PSMC1P62191 440 aaKnown RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 BTKQ06187 659 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 CHAF1AQ13111 956 aaPredicted RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 DUSP8Q13202 625 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 HABP2Q14520 560 aaPredicted RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 ELAVL1Q15717 326 aaKnown RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 FAM209BQ5JX69 171 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 ZNF783Q6ZMS7 281 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 ELOA2Q8IYF1 753 aaPredicted RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 FITM2Q8N6M3 262 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 ENAHQ8N8S7 591 aaPredicted RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 FEZF2Q8TBJ5 459 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 KBTBD7Q8WVZ9 684 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 ST8SIA2Q92186 375 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 TRIM54Q9BYV2 358 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 UNKQ9C0B0 810 aaKnown RBP6.71□□□□□ -1.34
CCDC50-203ENST00000460064 MEGF9Q9H1U4 602 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 PNPLA8Q9NP80 782 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 FAM30AQ9NZY2 134 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 SLC45A2Q9UMX9 530 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 CLCA2Q9UQC9 943 aa6.71□□□□□ -1.34
CCDC50-203ENST00000460064 IFRD1O00458 451 aaPredicted RBP6.7□□□□□ -1.34
CCDC50-203ENST00000460064 AGFG2O95081 481 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 IL18RAPO95256 599 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 GNAI2P04899 355 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 TNFSF4P23510 183 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 TXKP42681 527 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 STT3AP46977 705 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 ARFIP2P53365 341 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 C3orf38Q5JPI3 329 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 ZNF365Q70YC5 407 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 GPRIN1Q7Z2K8 1008 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 PDSS2Q86YH6 399 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 CCDC33Q8N5R6 958 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 OR2C3Q8N628 320 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 RNF169Q8NCN4 708 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 DEPTORQ8TB45 409 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 TBC1D15Q8TC07 691 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 PHACTR3Q96KR7 559 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 MPHOSPH9Q99550 1183 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 RLIMQ9NVW2 624 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 STK32BQ9NY57 414 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 SRRDQ9UH36 339 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 AFF4Q9UHB7 1163 aaKnown RBP6.7□□□□□ -1.34
CCDC50-203ENST00000460064 MED16Q9Y2X0 877 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 SH3BP1Q9Y3L3 701 aa6.7□□□□□ -1.34
CCDC50-203ENST00000460064 ABHD14A-ACY1A0A1B0GW23 586 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 CDHR4A6H8M9 788 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 DBX1A6NMT0 343 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 ZNF785A8K8V0 405 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 F8W8V4 182 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 IPO13O94829 963 aaKnown RBP6.69□□□□□ -1.34
CCDC50-203ENST00000460064 ANXA1P04083 346 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 THP07101 528 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 PARP1P09874 1014 aaKnown RBP6.69□□□□□ -1.34
CCDC50-203ENST00000460064 RARBP10826 455 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 HK1P19367 917 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 MSX2P35548 267 aaPredicted RBP6.69□□□□□ -1.34
CCDC50-203ENST00000460064 FOXL1Q12952 345 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 SLC13A2Q13183 592 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 DAG1Q14118 895 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 MED25Q71SY5 747 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 LIX1LQ8IVB5 337 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 GSPT2Q8IYD1 628 aaKnown RBP6.69□□□□□ -1.34
CCDC50-203ENST00000460064 D2HGDHQ8N465 521 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 SLC17A8Q8NDX2 589 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 ARFGAP3Q9NP61 516 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 STARD7Q9NQZ5 370 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 PPP4R1LQ9P1A2 415 aa6.69□□□□□ -1.34
CCDC50-203ENST00000460064 ZFR2Q9UPR6 939 aaKnown RBP6.69□□□□□ -1.34
CCDC50-203ENST00000460064 DRGXA6NNA5 263 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 F5H423 210 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms