RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 CHST7Q9NS84 486 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 LINC01565O15544 149 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 TBX10O75333 385 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 ADH1AP07327 375 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 KLRC2P26717 231 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 MCM4P33991 863 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 SURF1Q15526 300 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 SMAD2Q15796 467 aaKnown RBP23.56■■□□□ 1.36
SSNA1-202ENST00000459860 LLGL2Q6P1M3 1020 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 C12orf56Q8IXR9 622 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 FAM50BQ9Y247 325 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 VWA8A3KMH1 1905 aa23.56■■□□□ 1.36
SSNA1-202ENST00000459860 PDXKO00764 312 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 DCXO43602 365 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 CALUO43852 315 aaPredicted RBP23.55■■□□□ 1.36
SSNA1-202ENST00000459860 CLASP2O75122 1294 aaKnown RBP23.55■■□□□ 1.36
SSNA1-202ENST00000459860 KIAA0319Q5VV43 1072 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 C3orf58Q8NDZ4 430 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 ZSWIM2Q8NEG5 633 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 CACTINQ8WUQ7 758 aaKnown RBP23.55■■□□□ 1.36
SSNA1-202ENST00000459860 CASP10Q92851 521 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 B3GALT6Q96L58 329 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 KLHL5Q96PQ7 755 aa23.55■■□□□ 1.36
SSNA1-202ENST00000459860 MBTPS2O43462 519 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 EXOC3O60645 756 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 CNPP09543 421 aaKnown RBP23.54■■□□□ 1.36
SSNA1-202ENST00000459860 BRCC3P46736 316 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 TFAMQ00059 246 aaKnown RBP23.54■■□□□ 1.36
SSNA1-202ENST00000459860 SNRNP35Q16560 246 aaKnown RBP23.54■■□□□ 1.36
SSNA1-202ENST00000459860 RTP2Q5QGT7 225 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 CLEC17AQ6ZS10 378 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 CBWD2Q8IUF1 395 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 GUF1Q8N442 669 aaKnown RBP23.54■■□□□ 1.36
SSNA1-202ENST00000459860 PIK3R5Q8WYR1 880 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 PCDHA5Q9Y5H7 936 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 HCFC2Q9Y5Z7 792 aa23.54■■□□□ 1.36
SSNA1-202ENST00000459860 LILRB3O75022 631 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 GLP2RO95838 553 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 TMEM191BP0C7N4 346 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 PAX3P23760 479 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 GUCY2FP51841 1108 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 CLUL1Q15846 466 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 PSMD5Q16401 504 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 ELMSAN1Q6PJG2 1045 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 EFCAB13Q8IY85 973 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 RDH13Q8NBN7 331 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 FBXL18Q96ME1 805 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 KCTD10Q9H3F6 313 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 RXFP1Q9HBX9 757 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 DPP3Q9NY33 737 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 FNIP2Q9P278 1114 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 BARX2Q9UMQ3 279 aaPredicted RBP23.53■■□□□ 1.36
SSNA1-202ENST00000459860 MAPK8IP1Q9UQF2 711 aa23.53■■□□□ 1.36
SSNA1-202ENST00000459860 PLXNA3P51805 1871 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 SPDYE4A6NLX3 237 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 GOLGA6L22H0YM25 854 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 I3L4J1 428 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 FGFR3P22607 806 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 ZNF658Q5TYW1 1059 aaPredicted RBP23.52■■□□□ 1.36
SSNA1-202ENST00000459860 CD300LGQ6UXG3 332 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 ANKRD36BP1Q96IX9 119 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 MSLNLQ96KJ4 702 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 FNBP1Q96RU3 617 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 PDE11AQ9HCR9 933 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 DZANK1Q9NVP4 752 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 DPP7Q9UHL4 492 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 CD207Q9UJ71 328 aa23.52■■□□□ 1.36
SSNA1-202ENST00000459860 R3HCC1Q9Y3T6 440 aaKnown RBP23.52■■□□□ 1.36
SSNA1-202ENST00000459860 ARHGEF37A1IGU5 675 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 SYN3O14994 580 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 TEX28O15482 410 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 NR3C1P04150 777 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 TKTP29401 623 aaKnown RBP23.51■■□□□ 1.35
SSNA1-202ENST00000459860 SMAD4Q13485 552 aaKnown RBP23.51■■□□□ 1.35
SSNA1-202ENST00000459860 C9orf57Q5W0N0 161 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 PRSS55Q6UWB4 352 aaPredicted RBP23.51■■□□□ 1.35
SSNA1-202ENST00000459860 DSTYKQ6XUX3 929 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 TMEM184AQ6ZMB5 413 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 ANKS3Q6ZW76 656 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 SLC9A9Q8IVB4 645 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 APPL2Q8NEU8 664 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 VN1R2Q8NFZ6 395 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 SPATA20Q8TB22 786 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 ERCC4Q92889 916 aaPredicted RBP23.51■■□□□ 1.35
SSNA1-202ENST00000459860 SUSD3Q96L08 255 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 ZNF560Q96MR9 790 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 CLEC1BQ9P126 229 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 TRAF3IP3Q9Y228 551 aa23.51■■□□□ 1.35
SSNA1-202ENST00000459860 GLUD1P00367 558 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 TNNC2P02585 160 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 CLCN4P51793 760 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 STIM1Q13586 685 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 KCNC3Q14003 757 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 MYBPC2Q14324 1141 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 GLYCTKQ8IVS8 523 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 SMYD4Q8IYR2 804 aaPredicted RBP23.5■■□□□ 1.35
SSNA1-202ENST00000459860 LNX1Q8TBB1 728 aaPredicted RBP23.5■■□□□ 1.35
SSNA1-202ENST00000459860 PCDHB8Q9UN66 801 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 FRMD4BQ9Y2L6 1034 aa23.5■■□□□ 1.35
SSNA1-202ENST00000459860 H7C4K7 107 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms