RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 N4BP1O75113 896 aaKnown RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 YEATS4O95619 227 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 LDHAP00338 332 aaKnown RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 ASGR2P07307 311 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 CXCL8P10145 99 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 SRFP11831 508 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 TYMPP19971 482 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 SP100P23497 879 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 MARCKSP29966 332 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 ELF1P32519 619 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 BRCC3P46736 316 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 ROR1Q01973 937 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 NHLH1Q02575 133 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 DHX8Q14562 1220 aaKnown RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 ENOX2Q16206 610 aaKnown RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 SPATA1Q5VX52 437 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 CNNM4Q6P4Q7 775 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 GLYCTKQ8IVS8 523 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 LINC00301Q8NCQ3 95 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 BEST2Q8NFU1 509 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 SLC7A14Q8TBB6 771 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 DDX12PQ92771 950 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 DNAJC19Q96DA6 116 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 USP28Q96RU2 1077 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 MYADMQ96S97 322 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 RTP3Q9BQQ7 232 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 HAPLN2Q9GZV7 340 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 MAGEF1Q9HAY2 307 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 SLC2A4RGQ9NR83 387 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 GDE1Q9NZC3 331 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 AFF4Q9UHB7 1163 aaKnown RBP10.88□□□□□ -0.67
HDLBP-228ENST00000459788 CDH7Q9ULB5 785 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 PCDHB13Q9Y5F0 798 aa10.88□□□□□ -0.67
HDLBP-228ENST00000459788 OR6C75A6NL08 312 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 LACTBL1A8MY62 500 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 ADAM12O43184 909 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 IL18RAPO95256 599 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 LRG1P02750 347 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 HARSP12081 509 aaKnown RBP10.87□□□□□ -0.67
HDLBP-228ENST00000459788 PTPN2P17706 415 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 MCM4P33991 863 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 STAT6P42226 847 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 AMPD3Q01432 767 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 PLD1Q13393 1074 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 HTR4Q13639 388 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 MYBPC2Q14324 1141 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 STK38Q15208 465 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 STXBP4Q6ZWJ1 553 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 USP49Q70CQ1 688 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 HSCBQ8IWL3 235 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 SLC44A3Q8N4M1 653 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 C18orf25Q96B23 403 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-228ENST00000459788 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 ACCSQ96QU6 501 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 PYM1Q9BRP8 204 aaKnown RBP10.87□□□□□ -0.67
HDLBP-228ENST00000459788 TNMDQ9H2S6 317 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 FBXL5Q9UKA1 691 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 AGO2Q9UKV8 859 aaKnown RBP10.87□□□□□ -0.67
HDLBP-228ENST00000459788 DSEQ9UL01 958 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 FANCMQ8IYD8 2048 aa10.87□□□□□ -0.67
HDLBP-228ENST00000459788 NUP210Q8TEM1 1887 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-228ENST00000459788 ANO9A1A5B4 782 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 WDR27A2RRH5 827 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 MYMKA6NI61 221 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 PIRO00625 290 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 PRRG1O14668 218 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 ZNF197O14709 1029 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 SPTLC2O15270 562 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 GALR2O43603 387 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 CUTAO60888 179 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 CYP11A1P05108 521 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 AOC1P19801 751 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 GARTP22102 1010 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 NMT1P30419 496 aaKnown RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 YWHAHQ04917 246 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 SMARCB1Q12824 385 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 TMEM132DQ14C87 1099 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 CTXN3Q4LDR2 81 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 PABPC1LQ4VXU2 614 aaKnown RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 L1TD1Q5T7N2 865 aaKnown RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 ADALQ6DHV7 355 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 PHLDB3Q6NSJ2 640 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 SLC39A4Q6P5W5 647 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 RSPO2Q6UXX9 243 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 GRASPQ7Z6J2 395 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 USP37Q86T82 979 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 SFR1Q86XK3 245 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 CCDC65Q8IXS2 484 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 ELMOD1Q8N336 334 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 KCNG4Q8TDN1 519 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 CLIC6Q96NY7 704 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 MFSD1Q9H3U5 465 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 ZHX3Q9H4I2 956 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 TMEM206Q9H813 350 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 MRPL44Q9H9J2 332 aaKnown RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 TUBGCP4Q9UGJ1 667 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 RIF1Q5UIP0 2472 aaKnown RBP10.86□□□□□ -0.67
HDLBP-228ENST00000459788 F5P12259 2224 aa10.86□□□□□ -0.67
HDLBP-228ENST00000459788 FAM186AA6NE01 2351 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms