RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	GOLGA5	Q8TBA6	731 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	LNX1	Q8TBB1	728 aa	Predicted RBP	11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	SLC22A17	Q8WUG5	538 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	RIN2	Q8WYP3	895 aa	Predicted RBP	11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	CCDC127	Q96BQ5	260 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	CCDC34	Q96HJ3	373 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	SUSD3	Q96L08	255 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	TSPAN18	Q96SJ8	248 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	DUSP9	Q99956	384 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	TLE6	Q9H808	572 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	KIAA1586	Q9HCI6	787 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	INTS13	Q9NVM9	706 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	DPP3	Q9NY33	737 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	CLEC1B	Q9P126	229 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	HOOK1	Q9UJC3	728 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	VWA8	A3KMH1	1905 aa		11.11	□□□□□ -0.63
MRPL55-223	ENST00000459783	UNC80	Q8N2C7	3258 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	REV3L	O60673	3130 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	TEX28	O15482	410 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	TBC1D4	O60343	1298 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	UROD	P06132	367 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	EPCAM	P16422	314 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	NR2F2	P24468	414 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	POLR2B	P30876	1174 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	MCM4	P33991	863 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	LILRA4	P59901	499 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	MYBPC2	Q14324	1141 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	EDRF1	Q3B7T1	1238 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	USP41	Q3LFD5	358 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	TTI2	Q6NXR4	508 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	EFHB	Q8N7U6	833 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	PARD3B	Q8TEW8	1205 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	PIK3R5	Q8WYR1	880 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	PABPC5	Q96DU9	382 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	CGRRF1	Q99675	332 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	CLSTN3	Q9BQT9	956 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	TTPAL	Q9BTX7	342 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	NUP62CL	Q9H1M0	184 aa		11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	UBE2Z	Q9H832	354 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-223	ENST00000459783		H3BQ06	376 aa	Predicted RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783		M0QZQ0	153 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CALU	O43852	315 aa	Predicted RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	ITGB3	P05106	788 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	DLAT	P10515	647 aa	Known RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CCNE1	P24864	410 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	MCCD1	P59942	119 aa	Predicted RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CLDN10	P78369	228 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	MRPL58	Q14197	206 aa	Known RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	SKIV2L	Q15477	1246 aa	Known RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CEP135	Q66GS9	1140 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	KLHL10	Q6JEL2	608 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	LLGL2	Q6P1M3	1020 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	RBM43	Q6ZSC3	357 aa	Known RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CEP57	Q86XR8	500 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	NT5DC4	Q86YG4	428 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	WDR49	Q8IV35	697 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	GLYCTK	Q8IVS8	523 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	GPR65	Q8IYL9	337 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	ELMO3	Q96BJ8	720 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	MSLNL	Q96KJ4	702 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	MRPL17	Q9NRX2	175 aa	Known RBP	11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CLDND1	Q9NY35	253 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CDH22	Q9UJ99	828 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	AGAP1	Q9UPQ3	857 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	CTNND2	Q9UQB3	1225 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	HCFC2	Q9Y5Z7	792 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	BRWD1	Q9NSI6	2320 aa		11.09	□□□□□ -0.63
MRPL55-223	ENST00000459783	EYS	Q5T1H1	3165 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TULP1	O00294	542 aa	Predicted RBP	11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	XPOT	O43592	962 aa	Known RBP	11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	LRRN2	O75325	713 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	KIF20A	O95235	890 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	VNN1	O95497	513 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	CST3	P01034	146 aa	Predicted RBP	11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TRIM49	P0CI25	452 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TRIM49C	P0CI26	452 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	KCNA5	P22460	613 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	CA8	P35219	290 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	KCNQ1	P51787	676 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	CLCN4	P51793	760 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	STX17	P56962	302 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	PPP3CA	Q08209	521 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	ELAVL2	Q12926	359 aa	Known RBP	11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	ADAM9	Q13443	819 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	PSMD5	Q16401	504 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	DPCR1	Q3MIW9	517 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	VARS2	Q5ST30	1063 aa	Known RBP	11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TDRD10	Q5VZ19	366 aa	Known RBP	11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	LILRA6	Q6PI73	481 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	SYCE2	Q6PIF2	218 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TMEM184A	Q6ZMB5	413 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TRAPPC11	Q7Z392	1133 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TRIML1	Q8N9V2	468 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	TMC2	Q8TDI7	906 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	NELFB	Q8WX92	580 aa		11.08	□□□□□ -0.64
MRPL55-223	ENST00000459783	HLA-C	Q95604	372 aa		11.08	□□□□□ -0.64

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