RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 WDR49Q8IV35 697 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 RCOR2Q8IZ40 523 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 REPS2Q8NFH8 660 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 MAGEC3Q8TD91 643 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 DYDC1Q8WWB3 177 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 TCP11Q8WWU5 503 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 CFAP57Q96MR6 1250 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 DCLK3Q9C098 648 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 C2orf40Q9H1Z8 148 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 FAM124BQ9H5Z6 455 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 DHX33Q9H6R0 707 aaKnown RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 AZI2Q9H6S1 392 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF302Q9NR11 478 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 RBAKQ9NYW8 714 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 LGALS13Q9UHV8 139 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 ANAPC5Q9UJX4 755 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 EFR3BQ9Y2G0 817 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 ADGRA3Q8IWK6 1321 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 TLDC2A0PJX2 215 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 CCT8L1PA6NM43 557 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 CLDN3O15551 220 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF862O60290 1169 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 CLTAP09496 248 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 TGFB3P10600 412 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 DPEP1P16444 411 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 GNA15P30679 374 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 POLR2BP30876 1174 aaKnown RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ADCY8P40145 1251 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 SLC18A1P54219 525 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 NOMO3P69849 1222 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 PIGHQ14442 188 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 NEDD9Q14511 834 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 SKIDA1Q1XH10 827 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF568Q3ZCX4 644 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 DALRD3Q5D0E6 543 aaKnown RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 KCNV1Q6PIU1 500 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 PCGF5Q86SE9 256 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 CCDC13Q8IYE1 715 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 TMEM35BQ8NCS4 154 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 FEZF2Q8TBJ5 459 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 BSNDQ8WZ55 320 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 SGSM3Q96HU1 749 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ZFP91Q96JP5 570 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF317Q96PQ6 595 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 CDC42EP4Q9H3Q1 356 aaKnown RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 SEMA4AQ9H3S1 761 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 XPNPEP1Q9NQW7 623 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 CYP39A1Q9NYL5 469 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 NKIRAS1Q9NYS0 192 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ADAM22Q9P0K1 906 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 FETUBQ9UGM5 382 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF214Q9UL59 606 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 PTPN22Q9Y2R2 807 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 PCDHB4Q9Y5E5 795 aa9.4□□□□□ -0.9
HDAC3-202ENST00000459727 MAFBQ9Y5Q3 323 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-202ENST00000459727 ARID2Q68CP9 1835 aa9.4□□□□□ -0.91
HDAC3-202ENST00000459727 COL4A5P29400 1685 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 MROH7Q68CQ1 1323 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 A0A0B4J269 797 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 LOC102724159A0A0B4J2E5 919 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 CHUKO15111 745 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 MED7O43513 233 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 SUN1O94901 812 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 SHBGP04278 402 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 PTPRAP18433 802 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 FGFR4P22455 802 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 RRM1P23921 792 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 TMOD1P28289 359 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 SLC8A1P32418 973 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 ARL2P36404 184 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 NOP14P78316 857 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 KLF1Q13351 362 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 XRCC4Q13426 336 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 AUHQ13825 339 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 MXD4Q14582 209 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 PWP2Q15269 919 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 KYAT1Q16773 422 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 ANKRD20A8PQ5CZ79 823 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 WDR78Q5VTH9 848 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 TDRD10Q5VZ19 366 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 POLNQ7Z5Q5 900 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 CCDC91Q7Z6B0 441 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 PIGWQ7Z7B1 504 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 TDRPQ86YL5 185 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 CCDC60Q8IWA6 550 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 BRSK2Q8IWQ3 736 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 ZBTB8OSQ8IWT0 167 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 ZCCHC9Q8N567 271 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 NIPA2Q8N8Q9 360 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 RBBP8NLQ8NC74 664 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 ARHGEF2Q92974 986 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 MSTO1Q9BUK6 570 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 MRPL4Q9BYD3 311 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 OSBPL8Q9BZF1 889 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms