RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TOGARAM2Q6ZUX3 1019 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 ZNF365Q70YC5 407 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 CATSPER4Q7RTX7 472 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 ZBTB33Q86T24 672 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 SESTD1Q86VW0 696 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 FAM126BQ8IXS8 530 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 C17orf53Q8N3J3 647 aaPredicted RBP9.64□□□□□ -0.87
VPS50-207ENST00000458530 SLC43A3Q8NBI5 491 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 C16orf45Q96MC5 204 aaPredicted RBP9.64□□□□□ -0.87
VPS50-207ENST00000458530 SEZ6LQ9BYH1 1024 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 EPHX3Q9H6B9 360 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 RPF1Q9H9Y2 349 aaKnown RBP9.64□□□□□ -0.87
VPS50-207ENST00000458530 SIX2Q9NPC8 291 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 STARD7Q9NQZ5 370 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 TRMT1Q9NXH9 659 aaKnown RBP9.64□□□□□ -0.87
VPS50-207ENST00000458530 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 MYO1AQ9UBC5 1043 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 DNAJC12Q9UKB3 198 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 FHOD1Q9Y613 1164 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 ATP8B3O60423 1300 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 TRIP11Q15643 1979 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 MYADML2A6NDP7 307 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 F8VZ95 297 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 RNF225M0QZC1 329 aaPredicted RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 TULP1O00294 542 aaPredicted RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 KRT86O43790 486 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 KIF5CO60282 957 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 CLTAP09496 248 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 TMEM191BP0C7N4 346 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 ACTN1P12814 892 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 TNNT1P13805 278 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 TBXAS1P24557 533 aaPredicted RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 SOX5P35711 763 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 PRKCIP41743 596 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 KIF11P52732 1056 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 CRYBB1P53674 252 aaPredicted RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 JAM2P57087 298 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 DLG4P78352 724 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 ADAM17P78536 824 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 TFF2Q03403 129 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 CCDC85BQ15834 202 aaPredicted RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 ZACNQ401N2 412 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 IQCEQ6IPM2 695 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 NOTUMQ6P988 496 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 ZNF662Q6ZS27 426 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 NYAP1Q6ZVC0 841 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 SV2AQ7L0J3 742 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 NT5DC4Q86YG4 428 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 CD302Q8IX05 232 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 KIF18AQ8NI77 898 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 JAKMIP2Q96AA8 810 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 ANKRD36BP1Q96IX9 119 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 ZBTB45Q96K62 511 aaPredicted RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 CHP1Q99653 195 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 CCDC94Q9BW85 323 aaPredicted RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 CDT1Q9H211 546 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 HAUS4Q9H6D7 363 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 PTPRHQ9HD43 1115 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 IL23AQ9NPF7 189 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 RAB20Q9NX57 234 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 GTF2IRD1Q9UHL9 959 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 MSRAQ9UJ68 235 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 CPSF3Q9UKF6 684 aaKnown RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 PAXBP1Q9Y5B6 917 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 BRWD1Q9NSI6 2320 aa9.63□□□□□ -0.87
VPS50-207ENST00000458530 TCF20Q9UGU0 1960 aaKnown RBP9.63□□□□□ -0.87
VPS50-207ENST00000458530 ARVCFO00192 962 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 ABLIM1O14639 778 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 TLL1O43897 1013 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 B4GALT4O60513 344 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 TSPAN1O60635 241 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 GPR32O75388 356 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 CLSTN1O94985 981 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 ASGR1P07306 291 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 DARSP14868 501 aaKnown RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 ARF4P18085 180 aaPredicted RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 EIF4A3P38919 411 aaKnown RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 KCNQ1P51787 676 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 YARSP54577 528 aaKnown RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 YWHAEP62258 255 aaKnown RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 GCNT1Q02742 428 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 KIF5AQ12840 1032 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 MTF1Q14872 753 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 DRAP1Q14919 205 aaPredicted RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 AMHR2Q16671 573 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 DUOXA2Q1HG44 320 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 AAK1Q2M2I8 961 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 KIZQ2M2Z5 673 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 NBPF20Q3BBV1 942 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 FAM47CQ5HY64 1035 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 C1orf220Q5T0J3 134 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 SLC27A1Q6PCB7 646 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 CXCL17Q6UXB2 119 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 CRELD2Q6UXH1 353 aaPredicted RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 TMEM199Q8N511 208 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 ZSWIM2Q8NEG5 633 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms