RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 HSD3B1P14060 373 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 XPAP23025 273 aaPredicted RBP5.93□□□□□ -1.46
VPS41-209ENST00000457055 S100A5P33763 92 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 CNR2P34972 360 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ASMTP46597 345 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 AMPD2Q01433 879 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ZBTB16Q05516 673 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ITKQ08881 620 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 PDIA5Q14554 519 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ZXDCQ2QGD7 858 aaPredicted RBP5.93□□□□□ -1.46
VPS41-209ENST00000457055 KBTBD12Q3ZCT8 623 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ANKDD1AQ495B1 522 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 TM4SF20Q53R12 229 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 C2orf27AQ580R0 203 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 SH2D4BQ5SQS7 431 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 FKBP15Q5T1M5 1219 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 TATDN1Q6P1N9 297 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 HHIPL2Q6UWX4 724 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 CPNE8Q86YQ8 564 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 LURAP1LQ8IV03 231 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 FAM186BQ8IYM0 893 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 VPS52Q8N1B4 723 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 TMEM57Q8N5G2 664 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 SPERTQ8NA61 448 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 USP38Q8NB14 1042 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ERMNQ8TAM6 284 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 MTMR8Q96EF0 704 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 KIF1BPQ96EK5 621 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 C8orf76Q96K31 380 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ADPGKQ9BRR6 497 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 NCOR1P1Q9H4R4 102 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 ZWILCHQ9H900 591 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 TOPORSQ9NS56 1045 aaPredicted RBP5.93□□□□□ -1.46
VPS41-209ENST00000457055 RRN3Q9NYV6 651 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 PFDN2Q9UHV9 154 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 CNOT11Q9UKZ1 510 aaKnown RBP5.93□□□□□ -1.46
VPS41-209ENST00000457055 CNPY2Q9Y2B0 182 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 SSX2IPQ9Y2D8 614 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 MIA2Q96PC5 1412 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 CAMTA1Q9Y6Y1 1673 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 CDC42BPAQ5VT25 1732 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 LRRIQ1Q96JM4 1722 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 MCF2LO15068 1137 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 ZBTB14O43829 449 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 DKC1O60832 514 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS41-209ENST00000457055 DIAPH2O60879 1101 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 TGDSO95455 350 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 CD4P01730 458 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 MT-ND3P03897 115 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 THEGLP0DJG4 465 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 PAMP19021 973 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 KCNJ6P48051 423 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 MCM2P49736 904 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 CASP7P55210 303 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 EIF6P56537 245 aaKnown RBP5.92□□□□□ -1.46
VPS41-209ENST00000457055 GSCP56915 257 aaPredicted RBP5.92□□□□□ -1.46
VPS41-209ENST00000457055 MPP1Q00013 466 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 TRIM14Q14142 442 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 RCN1Q15293 331 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 ZNF827Q17R98 1081 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 TTC39AQ5SRH9 613 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 RETSATQ6NUM9 610 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 XRRA1Q6P2D8 792 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 INTS8Q75QN2 995 aaKnown RBP5.92□□□□□ -1.46
VPS41-209ENST00000457055 C19orf47Q8N9M1 422 aaKnown RBP5.92□□□□□ -1.46
VPS41-209ENST00000457055 ATP11CQ8NB49 1132 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 RUFY2Q8WXA3 655 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 DDX1Q92499 740 aaKnown RBP5.92□□□□□ -1.46
VPS41-209ENST00000457055 HPS3Q969F9 1004 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 NOX5Q96PH1 765 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 YIPF4Q9BSR8 244 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 TTPALQ9BTX7 342 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 HERC2P3Q9BVR0 1158 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 SLC26A6Q9BXS9 759 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 RABEP2Q9H5N1 569 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 KLHL11Q9NVR0 708 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 NTMQ9P121 344 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 CEP72Q9P209 647 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 STK39Q9UEW8 545 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 PALD1Q9ULE6 856 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 EFR3BQ9Y2G0 817 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 ATP11BQ9Y2G3 1177 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 DUSP10Q9Y6W6 482 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 SPAG9O60271 1321 aaKnown RBP5.92□□□□□ -1.46
VPS41-209ENST00000457055 EVC2Q86UK5 1308 aa5.92□□□□□ -1.46
VPS41-209ENST00000457055 A2MP01023 1474 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 TRBV23OR9-2A0A075B6M9 112 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 NPHP3-ACAD11A0A0J9YXS1 232 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 A0A1W2PQH9 124 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 HOXC11O43248 304 aaPredicted RBP5.91□□□□□ -1.46
VPS41-209ENST00000457055 XPOTO43592 962 aaKnown RBP5.91□□□□□ -1.46
VPS41-209ENST00000457055 NOBOXO60393 691 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 ZBED4O75132 1171 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 TSC22D2O75157 780 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 ZNF254O75437 659 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 ZBTB7AO95365 584 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 CPEP16870 476 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 CYP11B2P19099 503 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms