RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 TADA2AO75478 443 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 B3GAT3O94766 335 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 CA3P07451 260 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 LRPAP1P30533 357 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 CTNNB1P35222 781 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 PNPLA4P41247 253 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 UBASH3AP57075 661 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 MYL6P60660 151 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 ZNF699Q32M78 642 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 WDR44Q5JSH3 913 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 MIIPQ5JXC2 388 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 DCLRE1AQ6PJP8 1040 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 KCNT2Q6UVM3 1135 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 GBP6Q6ZN66 633 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 COLGALT1Q8NBJ5 622 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
LINC00887-204ENST00000456816 TAS1R2Q8TE23 839 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 HPDLQ96IR7 371 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 PAAF1Q9BRP4 392 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 CRACR2AQ9BSW2 395 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 IFNKQ9P0W0 207 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 GCNT4Q9P109 453 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 SIX4Q9UIU6 781 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 RWDD3Q9Y3V2 267 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 NT5C1B-RDH14C9J2C7 533 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 NRP1O14786 923 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 PPEF2O14830 753 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 CBFA2T2O43439 604 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 KIF4AO95239 1232 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 VNN1O95497 513 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 GALTP07902 379 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 PBX2P40425 430 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 TAF6P49848 677 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 UPP1Q16831 310 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 EXOC3L4Q17RC7 722 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 SV2CQ496J9 727 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 DSTYKQ6XUX3 929 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 LRRC52Q8N7C0 313 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 PBX4Q9BYU1 374 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 INTS2Q9H0H0 1204 aaKnown RBP15.21■□□□□ 0.03
LINC00887-204ENST00000456816 NKX2-4Q9H2Z4 354 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 SPG21Q9NZD8 308 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 MTUS1Q9ULD2 1270 aa15.21■□□□□ 0.03
LINC00887-204ENST00000456816 COLQQ9Y215 455 aaPredicted RBP15.21■□□□□ 0.03
LINC00887-204ENST00000456816 YBX2Q9Y2T7 364 aaKnown RBP15.21■□□□□ 0.03
LINC00887-204ENST00000456816 PTPRSQ13332 1948 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 LINC01553A4QN01 128 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 PIRO00625 290 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 P4HA1P13674 534 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 ATICP31939 592 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 PPM1AP35813 382 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 MCCD1P59942 119 aaPredicted RBP15.2■□□□□ 0.02
LINC00887-204ENST00000456816 TNNC1P63316 161 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 LRMPQ12912 555 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 SGSM1Q2NKQ1 1148 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 UVSSAQ2YD98 709 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 PPP2R2DQ66LE6 453 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 C15orf39Q6ZRI6 1047 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 TMEM169Q96HH4 297 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 PI4K2AQ9BTU6 479 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 PRO3102Q9H379 93 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 SLC28A3Q9HAS3 691 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
LINC00887-204ENST00000456816 ADAM28Q9UKQ2 775 aa15.2■□□□□ 0.02
LINC00887-204ENST00000456816 COL4A6Q14031 1691 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 ANK1P16157 1881 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 FNDC1Q4ZHG4 1894 aaPredicted RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 A0A1B0GTH6 734 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 A0A1W2PPC1 479 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 GTPBP10A4D1E9 387 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 F8W810 466 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 PMM2O15305 246 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 TRAPPC3O43617 180 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 CST3P01034 146 aaPredicted RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 SMAD3P84022 425 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 KRT17Q04695 432 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 WDR72Q3MJ13 1102 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 SCARA5Q6ZMJ2 495 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 TAF4BQ92750 862 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 SEMA4DQ92854 862 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 CLP1Q92989 425 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 NAP1L5Q96NT1 182 aaPredicted RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 NT5C1BQ96P26 610 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 MMS19Q96T76 1030 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 SNX9Q9Y5X1 595 aa15.19■□□□□ 0.02
LINC00887-204ENST00000456816 TDRD15B5MCY1 1934 aaKnown RBP15.19■□□□□ 0.02
LINC00887-204ENST00000456816 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.02
LINC00887-204ENST00000456816 ARHGEF37A1IGU5 675 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 KPNA7A9QM74 516 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 I3L4J1 428 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms