RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TRPC3Q13507 836 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 PTPROQ16827 1216 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 CDKAL1Q5VV42 579 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 RNF168Q8IYW5 571 aaPredicted RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 ZNF516Q92618 1163 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 TAF4BQ92750 862 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 CNOT6LQ96LI5 555 aaKnown RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 PAAF1Q9BRP4 392 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 TTYH1Q9H313 450 aaPredicted RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 VRTNQ9H8Y1 702 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 SIX4Q9UIU6 781 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 SSX2IPQ9Y2D8 614 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 CHD9Q3L8U1 2897 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 LAMA2P24043 3122 aaKnown RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 BECN2A8MW95 431 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 NT5C1B-RDH14C9J2C7 533 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 TULP1O00294 542 aaPredicted RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 SYN3O14994 580 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 PHACTR2O75167 634 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 SOD2P04179 222 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 TRIM49P0CI25 452 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 TRIM49CP0CI26 452 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 POLR2BP30876 1174 aaKnown RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 PBX3P40426 434 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 MXI1P50539 228 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 LILRA4P59901 499 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 PPP3CAQ08209 521 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 BIRC3Q13489 604 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 NCAPHQ15003 741 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 SV2CQ496J9 727 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 DCAF17Q5H9S7 520 aaPredicted RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 TCERG1LQ5VWI1 586 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 TDRD10Q5VZ19 366 aaKnown RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 LMBRD2Q68DH5 695 aaPredicted RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 FUT10Q6P4F1 479 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 PDXDC1Q6P996 788 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 CD300LGQ6UXG3 332 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 TMEM173Q86WV6 379 aaPredicted RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 FAM200AQ8TCP9 573 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 FAXDC2Q96IV6 333 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 SUSD3Q96L08 255 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 TSPY26PQ9H489 355 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 NGRNQ9NPE2 291 aaKnown RBP15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 FANCLQ9NW38 375 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 MTUS1Q9ULD2 1270 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 AGAP1Q9UPQ3 857 aa15.42■□□□□ 0.06
HMGXB4-204ENST00000455359 PTPRSQ13332 1948 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 LRRC10BA6NIK2 292 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 KCNJ18B7U540 433 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 M0QZQ0 153 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 KRT19P08727 400 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 FAM163BP0C2L3 166 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 POU3F3P20264 500 aaPredicted RBP15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 MTIF2P46199 727 aaKnown RBP15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 GCLMP48507 274 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 FXR1P51114 621 aaKnown RBP eCLIP15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 GUCY2FP51841 1108 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 TPM4P67936 248 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 NCOA4Q13772 614 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 KCNJ12Q14500 433 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 IQCB1Q15051 598 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 MAN2A1Q16706 1144 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 SGSM1Q2NKQ1 1148 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 USP41Q3LFD5 358 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 TCP11X2Q5H9J9 407 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 DHX40Q8IX18 779 aaKnown RBP15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 AOPEPQ8N6M6 819 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 APPL2Q8NEU8 664 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 SPATA18Q8TC71 538 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 BCL7CQ8WUZ0 217 aaPredicted RBP15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 POF1BQ8WVV4 589 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 HPDLQ96IR7 371 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 HERC2P3Q9BVR0 1158 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 OXCT2Q9BYC2 517 aaPredicted RBP15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 CHST7Q9NS84 486 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 SAMSN1Q9NSI8 373 aaKnown RBP15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 GDAP2Q9NXN4 497 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 DSEQ9UL01 958 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 COQ4Q9Y3A0 265 aa15.41■□□□□ 0.06
HMGXB4-204ENST00000455359 FNDC1Q4ZHG4 1894 aaPredicted RBP15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 KPNA7A9QM74 516 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 GRM6O15303 877 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 AFPP02771 609 aaKnown RBP15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 TPM2P07951 284 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 CTSAP10619 480 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 ZNF18P17022 549 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 TYMPP19971 482 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 FMO5P49326 533 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 CREMQ03060 361 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 KCNH2Q12809 1159 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 DPH6Q7L8W6 267 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 SPRED2Q7Z698 418 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 VPS52Q8N1B4 723 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 CCDC150Q8NCX0 1101 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 C3orf58Q8NDZ4 430 aa15.4■□□□□ 0.06
HMGXB4-204ENST00000455359 FBXL13Q8NEE6 735 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms