RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 FKTNO75072 461 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CYP1A1P04798 512 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 GALCP54803 685 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CENPCQ03188 943 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ZBTB6Q15916 424 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CLEC16AQ2KHT3 1053 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ZNF699Q32M78 642 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ZNF667Q5HYK9 610 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TMEM63BQ5T3F8 832 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CCSAPQ6IQ19 270 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CYP4F22Q6NT55 531 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ALKAL1Q6UXT8 129 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 DPH6Q7L8W6 267 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 LRRC57Q8N9N7 239 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ARRDC4Q8NCT1 418 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TRPV1Q8NER1 839 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 BEST2Q8NFU1 509 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TPCN2Q8NHX9 752 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 OLIG1Q8TAK6 271 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 LNX1Q8TBB1 728 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 MINDY3Q9H8M7 445 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ABCB6Q9NP58 842 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CYLDQ9NQC7 956 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 XPNPEP3Q9NQH7 507 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TMEM51Q9NW97 253 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 DDX20Q9UHI6 824 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 AJAP1Q9UKB5 411 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 STRIP2Q9ULQ0 834 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 UBQLN1Q9UMX0 589 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 SCINQ9Y6U3 715 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ZNF623O75123 536 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 KIF4AO95239 1232 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 PARNO95453 639 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 VTNP04004 478 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 EDN1P05305 212 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 CALB1P05937 261 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 COL6A1P12109 1028 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 HOXA11P31270 313 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 MAN1A1P33908 653 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 CHMP4BP1P59074 171 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 FMO1Q01740 532 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 ARID5AQ03989 594 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 INCA1Q0VD86 236 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 RPS6KA1Q15418 735 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 CFAP221Q4G0U5 840 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 PRAMEF19Q5SWL8 479 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 EEF1DP3Q658K8 133 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 GJB7Q6PEY0 223 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 ZBTB33Q86T24 672 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 UNC93AQ86WB7 457 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 GLYCTKQ8IVS8 523 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 RPUSD2Q8IZ73 545 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 PIP4P2Q8N4L2 257 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 ZSWIM2Q8NEG5 633 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 SNX27Q96L92 541 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 ZNF560Q96MR9 790 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 RUNDC3BQ96NL0 473 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 POP1Q99575 1024 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 XYLT2Q9H1B5 865 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 WNT8AQ9H1J5 351 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 RNF186Q9NXI6 227 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 WDR35Q9P2L0 1181 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 AMFRQ9UKV5 643 aa7.31□□□□□ -1.24
ECHDC1-210ENST00000454859 MACROD2A1Z1Q3 448 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 LACTBL1A8MY62 500 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 CCDC188H7C350 402 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 INPPL1O15357 1258 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 CYP26A1O43174 497 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 FTLP02792 175 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 WEE2P0C1S8 567 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 IQCF3P0C7M6 154 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 SETSIPP0DME0 302 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 UNGP13051 313 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 CHRNB2P17787 502 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 CTGFP29279 349 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 PRKCZQ05513 592 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 PTP4A2Q12974 167 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 BRD3Q15059 726 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 SLC10A6Q3KNW5 377 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 PAXIP1Q6ZW49 1069 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 NOP9Q86U38 636 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 THNSL1Q8IYQ7 743 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 MMGT1Q8N4V1 131 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 SLC43A3Q8NBI5 491 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 TMEM35BQ8NCS4 154 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 OR5B17Q8NGF7 314 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 ACTRT1Q8TDG2 376 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 TATDN2Q93075 761 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 CARD9Q9H257 536 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 HDAC6Q9UBN7 1215 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 CCDC66A2RUB6 948 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 B4GALT5O43286 388 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 ECM2O94769 699 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 KRT5P13647 590 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 GNA15P30679 374 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 NAP1L1P55209 391 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 TFAMQ00059 246 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms