RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 B4GALT3O60512 393 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 PHACTR2O75167 634 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 ADCY5O95622 1261 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 SLC9A1P19634 815 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 POLR2BP30876 1174 aaKnown RBP12.11□□□□□ -0.47
TRAF4-206ENST00000454852 PIK3CAP42336 1068 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 GATMP50440 423 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 TRPC3Q13507 836 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 SPECC1LQ69YQ0 1117 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 DCLRE1AQ6PJP8 1040 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 ZNF280BQ86YH2 543 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 CCDC150Q8NCX0 1101 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 RAD9AQ99638 391 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 NUP58Q9BVL2 599 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
TRAF4-206ENST00000454852 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 TTYH3Q9C0H2 523 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 INTS2Q9H0H0 1204 aaKnown RBP12.11□□□□□ -0.47
TRAF4-206ENST00000454852 PRO3102Q9H379 93 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 CWH43Q9H720 699 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 NRDE2Q9H7Z3 1164 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 MMRN2Q9H8L6 949 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 GDAP2Q9NXN4 497 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 APEX2Q9UBZ4 518 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 A0A1W2PQJ5 194 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
TRAF4-206ENST00000454852 PODXLO00592 558 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 NOL4O94818 638 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 UPP2O95045 317 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 EFEMP2O95967 443 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
TRAF4-206ENST00000454852 TAF6P49848 677 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 CLCNKBP51801 687 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 GUCY2FP51841 1108 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 LILRA4P59901 499 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 MYL6P60660 151 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 NOP14P78316 857 aaKnown RBP12.1□□□□□ -0.47
TRAF4-206ENST00000454852 MYO1EQ12965 1108 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 TRIM14Q14142 442 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 SHHQ15465 462 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 WDR44Q5JSH3 913 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 C9orf50Q5SZB4 431 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 KLHDC7AQ5VTJ3 777 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 CD300LGQ6UXG3 332 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 ENOSF1Q7L5Y1 443 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 DPH6Q7L8W6 267 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 SPATA18Q8TC71 538 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 CLP1Q92989 425 aaKnown RBP12.1□□□□□ -0.47
TRAF4-206ENST00000454852 HPDLQ96IR7 371 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 FAM193BQ96PV7 902 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-206ENST00000454852 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 GANQ9H2C0 597 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
TRAF4-206ENST00000454852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.1□□□□□ -0.475e-8■■■■□ 23.6
TRAF4-206ENST00000454852 PPEF2O14830 753 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 LRRN2O75325 713 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 ALDH2P05091 517 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 GALTP07902 379 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 KRT19P08727 400 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 UCHL3P15374 230 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 TBXAS1P24557 533 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 RNASELQ05823 741 aaKnown RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 BTG3Q14201 252 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 SV2CQ496J9 727 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 ZNF667Q5HYK9 610 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 TTC39CQ8N584 583 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 PDLIM2Q96JY6 352 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 RNPC3Q96LT9 517 aaKnown RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 YME1L1Q96TA2 773 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 BCO2Q9BYV7 579 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 CYP3A43Q9HB55 503 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 GOLGA2P5Q9HBQ8 144 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 APOBEC3GQ9HC16 384 aaKnown RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 CEP72Q9P209 647 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 R3HCC1Q9Y3T6 440 aaKnown RBP12.09□□□□□ -0.47
TRAF4-206ENST00000454852 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 SCN1AP35498 2009 aa12.09□□□□□ -0.47
TRAF4-206ENST00000454852 CASTOR2A6NHX0 329 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 M0QZQ0 153 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 NRP1O14786 923 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 SPTLC1O15269 473 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 TACC1O75410 805 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 P4HA1P13674 534 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms