RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CBWD2Q8IUF1 395 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 GUF1Q8N442 669 aaKnown RBP15.36■□□□□ 0.05
HDAC4-205ENST00000454542 CXorf38Q8TB03 319 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 RIN2Q8WYP3 895 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-205ENST00000454542 CCDC47Q96A33 483 aaKnown RBP15.36■□□□□ 0.05
HDAC4-205ENST00000454542 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
HDAC4-205ENST00000454542 DZANK1Q9NVP4 752 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 MTRRQ9UBK8 725 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 CD207Q9UJ71 328 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 MTCL1Q9Y4B5 1905 aaKnown RBP15.36■□□□□ 0.05
HDAC4-205ENST00000454542 GRXCR2A6NFK2 248 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 I3L4J1 428 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 M0QZQ0 153 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 PDXKO00764 312 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 C2CD2LO14523 706 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 MBTPS2O43462 519 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 TBC1D4O60343 1298 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 EPCAMP16422 314 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 HOXB8P17481 243 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-205ENST00000454542 PAX3P23760 479 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 CA8P35219 290 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 MRPL58Q14197 206 aaKnown RBP15.35■□□□□ 0.05
HDAC4-205ENST00000454542 PSMD5Q16401 504 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 KIAA1841Q6NSI8 718 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 PRSS55Q6UWB4 352 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-205ENST00000454542 XXYLT1Q8NBI6 393 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 SUSD6Q92537 303 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 FAM212AQ96EL1 285 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 GSDMAQ96QA5 445 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 GZF1Q9H116 711 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-205ENST00000454542 S1PR5Q9H228 398 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 TRAF3IP3Q9Y228 551 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 BACE2Q9Y5Z0 518 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 MUC3AQ02505 3323 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 PTPRJQ12913 1337 aa15.35■□□□□ 0.05
HDAC4-205ENST00000454542 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 CLIC2O15247 247 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 KINO60870 393 aaKnown RBP15.34■□□□□ 0.05
HDAC4-205ENST00000454542 KIF20AO95235 890 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 IL9P15248 144 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 MCM4P33991 863 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 CYP24A1Q07973 514 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 MYBPC2Q14324 1141 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 SMAD2Q15796 467 aaKnown RBP15.34■□□□□ 0.05
HDAC4-205ENST00000454542 SNRNP35Q16560 246 aaKnown RBP15.34■□□□□ 0.05
HDAC4-205ENST00000454542 PTCRAQ6ISU1 281 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-205ENST00000454542 LLGL2Q6P1M3 1020 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 LILRA6Q6PI73 481 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 C1orf127Q8N9H9 656 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 CLSTN3Q9BQT9 956 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 RMND1Q9NWS8 449 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 PCDHB8Q9UN66 801 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 NUB1Q9Y5A7 615 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 PCDHA5Q9Y5H7 936 aa15.34■□□□□ 0.05
HDAC4-205ENST00000454542 C2orf16Q68DN1 1984 aa15.33■□□□□ 0.05
HDAC4-205ENST00000454542 SPTLC1O15269 473 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 GLUD1P00367 558 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 RPL17P18621 184 aaKnown RBP15.33■□□□□ 0.04
HDAC4-205ENST00000454542 KLRC2P26717 231 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 CYP2J2P51589 502 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 LILRA4P59901 499 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 PSMD6Q15008 389 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 SURF1Q15526 300 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 VARS2Q5ST30 1063 aaKnown RBP15.33■□□□□ 0.04
HDAC4-205ENST00000454542 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 ANKS3Q6ZW76 656 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 WDR49Q8IV35 697 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 CMASQ8NFW8 434 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-205ENST00000454542 HDAC7Q8WUI4 952 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 MFSD14AQ96MC6 490 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 SFXN1Q9H9B4 322 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 PDE11AQ9HCR9 933 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 INTS13Q9NVM9 706 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 DPP3Q9NY33 737 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
HDAC4-205ENST00000454542 FBXW11Q9UKB1 542 aa15.33■□□□□ 0.04
HDAC4-205ENST00000454542 TCF20Q9UGU0 1960 aaKnown RBP15.33■□□□□ 0.04
HDAC4-205ENST00000454542 A0A0C4DFX4 3053 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 ADAM12O43184 909 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 TGM5O43548 720 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 SMC2O95347 1197 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 NR3C1P04150 777 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 TYMPP19971 482 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 RAB33AQ14088 237 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 CLUL1Q15846 466 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 ZNF658Q5TYW1 1059 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-205ENST00000454542 RSPO2Q6UXX9 243 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-205ENST00000454542 EP400NLQ6ZTU2 488 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 PLEKHO2Q8TD55 490 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 ADAMTS19Q8TE59 1207 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 SMARCE1Q969G3 411 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 BORCS6Q96GS4 357 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 FAM84AQ96KN4 292 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 ZNF560Q96MR9 790 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 CGRRF1Q99675 332 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 MTMR12Q9C0I1 747 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 MAN1C1Q9NR34 630 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms