RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ACCSQ96QU6 501 aa11.61□□□□□ -0.55
DDX39A-203ENST00000454233 CUEDC2Q9H467 287 aa11.61□□□□□ -0.55
DDX39A-203ENST00000454233 PANK4Q9NVE7 773 aa11.61□□□□□ -0.55
DDX39A-203ENST00000454233 TBC1D7Q9P0N9 293 aa11.61□□□□□ -0.55
DDX39A-203ENST00000454233 CPSF3Q9UKF6 684 aaKnown RBP11.61□□□□□ -0.55
DDX39A-203ENST00000454233 AGO2Q9UKV8 859 aaKnown RBP11.61□□□□□ -0.55
DDX39A-203ENST00000454233 PCDHB8Q9UN66 801 aa11.61□□□□□ -0.55
DDX39A-203ENST00000454233 PCDHB13Q9Y5F0 798 aa11.61□□□□□ -0.55
DDX39A-203ENST00000454233 PDCD11Q14690 1871 aaKnown RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 PRRG1O14668 218 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 N4BP1O75113 896 aaKnown RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 PPP1R37O75864 691 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ADRB2P07550 413 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 POU2F2P09086 479 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 FSHRP23945 695 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ACOT2P49753 483 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 AMPD3Q01432 767 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 POU5F1Q01860 360 aaKnown RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ROR1Q01973 937 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 MRPL58Q14197 206 aaKnown RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 TMEM132DQ14C87 1099 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 L1TD1Q5T7N2 865 aaKnown RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 SPATA1Q5VX52 437 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ATL3Q6DD88 541 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 JADE1Q6IE81 842 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 DSTYKQ6XUX3 929 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 STXBP4Q6ZWJ1 553 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 USP37Q86T82 979 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 SYCP3Q8IZU3 236 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 IQUBQ8NA54 791 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ZNF461Q8TAF7 563 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 KCNG4Q8TDN1 519 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 NXPE3Q969Y0 559 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 MYADMQ96S97 322 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ASB7Q9H672 318 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 KCNK12Q9HB15 430 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 OLFML3Q9NRN5 406 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 EPS15L1Q9UBC2 864 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 FBXL5Q9UKA1 691 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 DERAQ9Y315 318 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 STYXL1Q9Y6J8 313 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ZFP37Q9Y6Q3 630 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-203ENST00000454233 MYH15Q9Y2K3 1946 aa11.6□□□□□ -0.55
DDX39A-203ENST00000454233 ARHGEF37A1IGU5 675 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 FRMD3A2A2Y4 597 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 TISP43B9A030 160 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 TBC1D4O60343 1298 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 LRG1P02750 347 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 PAX3P23760 479 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 GUCY2FP51841 1108 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 YWHAHQ04917 246 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-203ENST00000454233 TPGS2Q68CL5 300 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 DHX58Q96C10 678 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 PRRX2Q99811 253 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 STRA6Q9BX79 667 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 OXCT2Q9BYC2 517 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-203ENST00000454233 MFSD1Q9H3U5 465 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 SMOC2Q9H3U7 446 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 FAM13BQ9NYF5 915 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 CFAP45Q9UL16 551 aa11.59□□□□□ -0.55
DDX39A-203ENST00000454233 WDR27A2RRH5 827 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 M0QZQ0 153 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-203ENST00000454233 ABLIM3O94929 683 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 IL18RAPO95256 599 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 LDHAP00338 332 aaKnown RBP11.58□□□□□ -0.56
DDX39A-203ENST00000454233 NFICP08651 508 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 LAMP2P13473 410 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 CPB1P15086 417 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 ATF2P15336 505 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 ME1P48163 572 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 AARSP49588 968 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■■■■ 30.9
DDX39A-203ENST00000454233 NTHL1P78549 312 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 PABPC1LQ4VXU2 614 aaKnown RBP11.58□□□□□ -0.56
DDX39A-203ENST00000454233 SHC4Q6S5L8 630 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 TCEAL8Q8IYN2 117 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 TMEM206Q9H813 350 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 MAGEF1Q9HAY2 307 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 CYP4F11Q9HBI6 524 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 KBTBD4Q9NVX7 518 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 AFF4Q9UHB7 1163 aaKnown RBP11.58□□□□□ -0.56
DDX39A-203ENST00000454233 FBXL21Q9UKT6 434 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 CDH7Q9ULB5 785 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 MAFFQ9ULX9 164 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 DUSP12Q9UNI6 340 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 C2CD2Q9Y426 696 aa11.58□□□□□ -0.56
DDX39A-203ENST00000454233 OR6C75A6NL08 312 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 OAZ2O95190 189 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 ODC1P11926 461 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 PTPN2P17706 415 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 TYMPP19971 482 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 GARTP22102 1010 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 ADSSP30520 456 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 CASP5P51878 434 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 LILRA4P59901 499 aa11.57□□□□□ -0.56
DDX39A-203ENST00000454233 ASIC1P78348 528 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms