RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 EML5Q05BV3 1969 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 IGSF9BQ9UPX0 1349 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 HIVEP3Q5T1R4 2406 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 MYH8P13535 1937 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 PI4KAP42356 2102 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 EIF3JO75822 258 aaKnown RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 IDH1O75874 414 aaKnown RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 CFBP00751 764 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 HOXB4P17483 251 aaPredicted RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 ELAVL4P26378 380 aaKnown RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 KLRC2P26717 231 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 IL12RB1P42701 662 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 GRIA4P48058 902 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 BCAR1P56945 870 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 RAC1P63000 192 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 MRPS6P82932 125 aaKnown RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 CREB5Q02930 508 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 MRPL58Q14197 206 aaKnown RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 LINC00114Q6XXX2 140 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 Q6ZS52 159 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 MTSS1LQ765P7 747 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 GET4Q7L5D6 327 aaPredicted RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 SLCO6A1Q86UG4 719 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 MARCH9Q86YJ5 346 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 TBC1D5Q92609 795 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 FGF13Q92913 245 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 ADAM2Q99965 735 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 KXD1Q9BQD3 176 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 CEP44Q9C0F1 390 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 CLEC4MQ9H2X3 399 aaPredicted RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 SOX17Q9H6I2 414 aaPredicted RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 ANTXR1Q9H6X2 564 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 ELAC1Q9H777 363 aaKnown RBP6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 MKNK2Q9HBH9 465 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 OSGEPQ9NPF4 335 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 TMEM161AQ9NX61 479 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 COL20A1Q9P218 1284 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 VTI1BQ9UEU0 232 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 CABIN1Q9Y6J0 2220 aa6.13□□□□□ -1.43
SBDSP1-204ENST00000453858 TCRBV5S4A2TA0A5A2 114 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 B4DLN1 442 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 H3BRJ5 948 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 ECI2O75521 394 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 KRT10P13645 584 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 CD59P13987 128 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 PXNP49023 591 aaPredicted RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 ST13P50502 369 aaKnown RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 MRPL12P52815 198 aaKnown RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 NID2Q14112 1375 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 BMS1Q14692 1282 aaKnown RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 STXBP2Q15833 593 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 TMEM266Q2M3C6 531 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 SYDE2Q5VT97 1194 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 RCSD1Q6JBY9 416 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 DCHS2Q6V1P9 2916 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 LCORLQ8N3X6 602 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 HDAC7Q8WUI4 952 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 CNTNAP5Q8WYK1 1306 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 FAM3CQ92520 227 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 DNASE1L2Q92874 299 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 CEP95Q96GE4 821 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 IGSF21Q96ID5 467 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 HHIPQ96QV1 700 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 TAAR1Q96RJ0 339 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 IWS1Q96ST2 819 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 NOTCH4Q99466 2003 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 MPHOSPH6Q99547 160 aaKnown RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 DBNDD2Q9BQY9 259 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 SALL3Q9BXA9 1300 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 TRIM4Q9C037 500 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 LACRTQ9GZZ8 138 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 ATP6V0A4Q9HBG4 840 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 TRPV5Q9NQA5 729 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 ATP8A2Q9NTI2 1148 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 RBM12Q9NTZ6 932 aaKnown RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 STAB1Q9NY15 2570 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 KIAA1522Q9P206 1035 aaPredicted RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 EVLQ9UI08 416 aaPredicted RBP6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 MAN2B2Q9Y2E5 1009 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 TELO2Q9Y4R8 837 aa6.12□□□□□ -1.43
SBDSP1-204ENST00000453858 KDM3AQ9Y4C1 1321 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 DCLK1O15075 740 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 TLX3O43711 291 aaPredicted RBP6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 EXTL3O43909 919 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 GGPS1O95749 300 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 C1RP00736 705 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 USP17L7P0C7H9 530 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 FTH1P19P0C7X4 201 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 RLBP1P12271 317 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 MCCP23508 829 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 EXOSC9Q06265 439 aaKnown RBP6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 PAK2Q13177 524 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 TRIP6Q15654 476 aaKnown RBP6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 SPRED3Q2MJR0 410 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 PLA2G4EQ3MJ16 856 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 PRRT3Q5FWE3 981 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 CLLU1OSQ5K130 101 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 CTR9Q6PD62 1173 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms