RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ZNF233A6NK53 670 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
VCX3B-204ENST00000453306 NFICP08651 508 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 FKBP3Q00688 224 aaKnown RBP16.98■□□□□ 0.31
VCX3B-204ENST00000453306 NHLH1Q02575 133 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 CYP24A1Q07973 514 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 PLPP4Q5VZY2 271 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 CEP135Q66GS9 1140 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 JADE1Q6IE81 842 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 KCNT2Q6UVM3 1135 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 GLB1LQ6UWU2 654 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 TMEM184AQ6ZMB5 413 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 TRIM67Q6ZTA4 783 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 RABGGTAQ92696 567 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 PBXIP1Q96AQ6 731 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 FAM212AQ96EL1 285 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 RPGRIP1Q96KN7 1286 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 NRDE2Q9H7Z3 1164 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 PLEKHA5Q9HAU0 1116 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 RBAKQ9NYW8 714 aaPredicted RBP16.98■□□□□ 0.31
VCX3B-204ENST00000453306 SPG21Q9NZD8 308 aa16.98■□□□□ 0.31
VCX3B-204ENST00000453306 FNDC1Q4ZHG4 1894 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 CARNS1A5YM72 827 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 TMEM221A6NGB7 291 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 F8W810 466 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 M0R296 226 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 LDHAP00338 332 aaKnown RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 CCDC192P0DO97 292 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 HOXB8P17481 243 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 ZXDAP98168 799 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 DSC1Q08554 894 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 PSMD6Q15008 389 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 IQCB1Q15051 598 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 CT47A1Q5JQC4 288 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 LMBRD2Q68DH5 695 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 CD300LGQ6UXG3 332 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 TMC7Q7Z402 723 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 APBB1IPQ7Z5R6 666 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 FILIP1Q7Z7B0 1213 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 SUGP1Q8IWZ8 645 aaKnown RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 CSGALNACT2Q8N6G5 542 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 OR5B17Q8NGF7 314 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 CXorf38Q8TB03 319 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 ENOX1Q8TC92 643 aaKnown RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 SUSD6Q92537 303 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 TSG101Q99816 390 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 MRPL9Q9BYD2 267 aaKnown RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 GOLGA2P5Q9HBQ8 144 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 UBN1Q9NPG3 1134 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 SAMSN1Q9NSI8 373 aaKnown RBP16.97■□□□□ 0.31
VCX3B-204ENST00000453306 DNAJB4Q9UDY4 337 aa16.97■□□□□ 0.31
VCX3B-204ENST00000453306 C5orf42Q9H799 3197 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 CETN3O15182 167 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
VCX3B-204ENST00000453306 PBX3P40426 434 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 MRE11P49959 708 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 ZNF445P59923 1031 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 KYAT1Q16773 422 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 SPATA1Q5VX52 437 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 ANKRD54Q6NXT1 300 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 FAM186BQ8IYM0 893 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 PARD3BQ8TEW8 1205 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 CASP10Q92851 521 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 CCDC127Q96BQ5 260 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 KIAA1586Q9HCI6 787 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.31
VCX3B-204ENST00000453306 BICDL2A1A5D9 508 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 LRRIQ3A6PVS8 624 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-204ENST00000453306 PPEF2O14830 753 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 MAPK13O15264 365 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 PSMC2P35998 433 aaKnown RBP16.95■□□□□ 0.3
VCX3B-204ENST00000453306 ALDH7A1P49419 539 aaKnown RBP16.95■□□□□ 0.3
VCX3B-204ENST00000453306 YARSP54577 528 aaKnown RBP16.95■□□□□ 0.3
VCX3B-204ENST00000453306 CLDN10P78369 228 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 SMC1AQ14683 1233 aaKnown RBP16.95■□□□□ 0.3
VCX3B-204ENST00000453306 HSP90AA4PQ58FG1 418 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 TMEM173Q86WV6 379 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-204ENST00000453306 COLGALT2Q8IYK4 626 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 HACE1Q8IYU2 909 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 VN1R2Q8NFZ6 395 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 BCL7CQ8WUZ0 217 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-204ENST00000453306 CEP63Q96MT8 703 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 MKNK1Q9BUB5 465 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 ASB7Q9H672 318 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
VCX3B-204ENST00000453306 TRIM49P0CI25 452 aa16.94■□□□□ 0.3
VCX3B-204ENST00000453306 TRIM49CP0CI26 452 aa16.94■□□□□ 0.3
VCX3B-204ENST00000453306 SLC11A1P49279 550 aa16.94■□□□□ 0.3
VCX3B-204ENST00000453306 PTPN5P54829 565 aa16.94■□□□□ 0.3
VCX3B-204ENST00000453306 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
VCX3B-204ENST00000453306 PPP2R3AQ06190 1150 aa16.94■□□□□ 0.3
VCX3B-204ENST00000453306 PPP3CAQ08209 521 aa16.94■□□□□ 0.3
VCX3B-204ENST00000453306 SIGLEC14Q08ET2 396 aa16.94■□□□□ 0.3
VCX3B-204ENST00000453306 KCNC3Q14003 757 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms