RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
DDR1-239ENST00000452441 ATP5OP48047 213 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 RFX6Q8HWS3 928 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
DDR1-239ENST00000452441 OLFML3Q9NRN5 406 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 SLC12A6Q9UHW9 1150 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 NFS1Q9Y697 457 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 EIF3DO15371 548 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDR1-239ENST00000452441 TRAPPC3O43617 180 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 NEBLO76041 1014 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 TNNC2P02585 160 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 MYBL1P10243 752 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 TXNP10599 105 aaKnown RBP11.85□□□□□ -0.51
DDR1-239ENST00000452441 RGS7P49802 495 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 CLCN3P51790 818 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 SPIRE1Q08AE8 756 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 PPP2R5CQ13362 524 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 SPRED3Q2MJR0 410 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 WDR72Q3MJ13 1102 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 ZNF568Q3ZCX4 644 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 MDH1BQ5I0G3 518 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 SLC13A5Q86YT5 568 aaPredicted RBP11.85□□□□□ -0.51
DDR1-239ENST00000452441 CCDC60Q8IWA6 550 aaPredicted RBP11.85□□□□□ -0.51
DDR1-239ENST00000452441 XPO6Q96QU8 1125 aaKnown RBP11.85□□□□□ -0.51
DDR1-239ENST00000452441 ZSWIM1Q9BR11 485 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 STMN4Q9H169 189 aaPredicted RBP11.85□□□□□ -0.51
DDR1-239ENST00000452441 SLC38A10Q9HBR0 1119 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 NOD1Q9Y239 953 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 RAP1GAPP47736 663 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 ARSEP51690 589 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 OVGP1Q12889 678 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 DNAJC3Q13217 504 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 HYIQ5T013 277 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 FOXR2Q6PJQ5 311 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 COPS5Q92905 334 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 FAM167BQ9BTA0 163 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 KIAA1683Q9H0B3 1180 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 SEPT10Q9P0V9 454 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
DDR1-239ENST00000452441 TAF1LQ8IZX4 1826 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 A0A0G2JND7 137 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 CCDC78A2IDD5 438 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 DGAT1O75907 488 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 PTPRAP18433 802 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 COILP38432 576 aaPredicted RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 SETDB1Q15047 1291 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 ZBTB41Q5SVQ8 909 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 TMEM130Q8N3G9 435 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 C1orf131Q8NDD1 294 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDR1-239ENST00000452441 FAM149B1Q96BN6 582 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 MRIQ9BWK5 157 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 OSBPL7Q9BZF2 842 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 CDC42EP4Q9H3Q1 356 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 PIH1D1Q9NWS0 290 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 PHF2O75151 1096 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 CHRNA3P32297 505 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 CDH8P55286 799 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 SNCBQ16143 134 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 MAPK6Q16659 721 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 AMHR2Q16671 573 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 BTNL9Q6UXG8 535 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 PRELID2Q8N945 189 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 MICAL1Q8TDZ2 1067 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 MIS12Q9H081 205 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 C12orf65Q9H3J6 166 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 CYP26B1Q9NR63 512 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 L3MBTL1Q9Y468 752 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 STAM2O75886 525 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 CCNE2O96020 404 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 GTF2H1P32780 548 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 MYO1EQ12965 1108 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 PDIA2Q13087 525 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 RCN2Q14257 317 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 XKR3Q5GH77 459 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 C1orf228Q6PIY5 440 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 EPS8L1Q8TE68 723 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 TTC17Q96AE7 1141 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 TGS1Q96RS0 853 aaKnown RBP11.84□□□□□ -0.51
DDR1-239ENST00000452441 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDR1-239ENST00000452441 TMEM121Q9BTD3 319 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 SIX2Q9NPC8 291 aa11.84□□□□□ -0.51
DDR1-239ENST00000452441 CCDC195A0A1B0GUA6 201 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 DNM1LO00429 736 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 CES2O00748 559 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 CFHP08603 1231 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 PSMA2P25787 234 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 CHKAP35790 457 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 PRKCIP41743 596 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms