RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FSD2A1L4K1 749 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 CLIC2O15247 247 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 KIF20AO95235 890 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 SMC2O95347 1197 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 URODP06132 367 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 LRPAP1P30533 357 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 DSG1Q02413 1049 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 ELAVL2Q12926 359 aaKnown RBP21.63■■□□□ 1.05
COL9A3-202ENST00000452372 SPATA1Q5VX52 437 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 NT5DC4Q86YG4 428 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 BRSK2Q8IWQ3 736 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 GPR65Q8IYL9 337 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 C3orf58Q8NDZ4 430 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 GOLGA5Q8TBA6 731 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 FBXL18Q96ME1 805 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 GSDMAQ96QA5 445 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 PHF7Q9BWX1 381 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-202ENST00000452372 RMND1Q9NWS8 449 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 PCDHA5Q9Y5H7 936 aa21.63■■□□□ 1.05
COL9A3-202ENST00000452372 PDXKO00764 312 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 CA8P35219 290 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 GLUD2P49448 558 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 TMEM132DQ14C87 1099 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 KIAA1841Q6NSI8 718 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 LLGL2Q6P1M3 1020 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 BEST2Q8NFU1 509 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 EDAQ92838 391 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 KCTD10Q9H3F6 313 aa21.62■■□□□ 1.05
COL9A3-202ENST00000452372 RBAKQ9NYW8 714 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-202ENST00000452372 ZNF233A6NK53 670 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 TRAPPC3O43617 180 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 CLASP2O75122 1294 aaKnown RBP21.61■■□□□ 1.05
COL9A3-202ENST00000452372 NFICP08651 508 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 FAM171A1Q5VUB5 890 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 HFE2Q6ZVN8 426 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 GUF1Q8N442 669 aaKnown RBP21.61■■□□□ 1.05
COL9A3-202ENST00000452372 XXYLT1Q8NBI6 393 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 NOC3LQ8WTT2 800 aaKnown RBP21.61■■□□□ 1.05
COL9A3-202ENST00000452372 TMEM174Q8WUU8 243 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 SMARCE1Q969G3 411 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 B3GALT6Q96L58 329 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 CDH22Q9UJ99 828 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 ZDBF2Q9HCK1 2354 aa21.61■■□□□ 1.05
COL9A3-202ENST00000452372 C2CD2LO14523 706 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 CNPP09543 421 aaKnown RBP21.6■■□□□ 1.05
COL9A3-202ENST00000452372 BRCC3P46736 316 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 CBWD2Q8IUF1 395 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 TMEM130Q8N3G9 435 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 ERCC4Q92889 916 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-202ENST00000452372 RPGRIP1Q96KN7 1286 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 KLHL5Q96PQ7 755 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 TTPALQ9BTX7 342 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 APOL5Q9BWW9 433 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 EMILIN2Q9BXX0 1053 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 RXFP1Q9HBX9 757 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 NUB1Q9Y5A7 615 aa21.6■■□□□ 1.05
COL9A3-202ENST00000452372 VWA8A3KMH1 1905 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 HOXD11P31277 338 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-202ENST00000452372 CYP2J2P51589 502 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 GUCY2FP51841 1108 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 WNT7BP56706 349 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 SURF1Q15526 300 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 SNRNP35Q16560 246 aaKnown RBP21.59■■□□□ 1.05
COL9A3-202ENST00000452372 RTP2Q5QGT7 225 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 ZNF658Q5TYW1 1059 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-202ENST00000452372 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-202ENST00000452372 SLC9A9Q8IVB4 645 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 EFCAB13Q8IY85 973 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 RIN2Q8WYP3 895 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-202ENST00000452372 GBP4Q96PP9 640 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 GTPBP4Q9BZE4 634 aaKnown RBP21.59■■□□□ 1.05
COL9A3-202ENST00000452372 PDE11AQ9HCR9 933 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.59■■□□□ 1.05
COL9A3-202ENST00000452372 DMAC2Q9NW81 257 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 DPP3Q9NY33 737 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 MAPK8IP1Q9UQF2 711 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 TRAF3IP3Q9Y228 551 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 HCFC2Q9Y5Z7 792 aa21.59■■□□□ 1.05
COL9A3-202ENST00000452372 HOXB8P17481 243 aaPredicted RBP21.58■■□□□ 1.05
COL9A3-202ENST00000452372 FGFR3P22607 806 aa21.58■■□□□ 1.05
COL9A3-202ENST00000452372 C9orf57Q5W0N0 161 aa21.58■■□□□ 1.05
COL9A3-202ENST00000452372 PPFIBP1Q86W92 1011 aa21.58■■□□□ 1.05
COL9A3-202ENST00000452372 CEP57Q86XR8 500 aa21.58■■□□□ 1.05
COL9A3-202ENST00000452372 RDH13Q8NBN7 331 aa21.58■■□□□ 1.05
COL9A3-202ENST00000452372 CACTINQ8WUQ7 758 aaKnown RBP21.58■■□□□ 1.05
COL9A3-202ENST00000452372 PIK3R5Q8WYR1 880 aa21.58■■□□□ 1.05
COL9A3-202ENST00000452372 FNIP2Q9P278 1114 aa21.58■■□□□ 1.05
COL9A3-202ENST00000452372 ANO9A1A5B4 782 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 I3L4J1 428 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 PIRO00625 290 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 CALUO43852 315 aaPredicted RBP21.57■■□□□ 1.04
COL9A3-202ENST00000452372 KLRC2P26717 231 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 ZXDAP98168 799 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 CREMQ03060 361 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 MYBPC2Q14324 1141 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 COBLL1Q53SF7 1204 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 PDXDC1Q6P996 788 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 SMYD4Q8IYR2 804 aaPredicted RBP21.57■■□□□ 1.04
COL9A3-202ENST00000452372 LNX1Q8TBB1 728 aaPredicted RBP21.57■■□□□ 1.04
COL9A3-202ENST00000452372 FEZF2Q8TBJ5 459 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms