RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 DYMQ7RTS9 669 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 ZDHHC14Q8IZN3 488 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 TTC13Q8NBP0 860 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 CMASQ8NFW8 434 aaPredicted RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 RSAD2Q8WXG1 361 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 LARP4BQ92615 738 aaKnown RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 ZNF707Q96C28 371 aaPredicted RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 ASIC4Q96FT7 647 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 UROC1Q96N76 676 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 NTPCRQ9BSD7 190 aaKnown RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 HAPLN2Q9GZV7 340 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PLEKHA4Q9H4M7 779 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PARVGQ9HBI0 331 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 SLC38A7Q9NVC3 462 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 FBXW11Q9UKB1 542 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 ODF2LQ9ULJ1 636 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 NUB1Q9Y5A7 615 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 CDY1Q9Y6F8 540 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 H0YCG3 227 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 TMEM189-UBE2V1I3L0A0 370 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 SLC26A4O43511 780 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 TRAPPC3O43617 180 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 TRAK2O60296 914 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 N4BP1O75113 896 aaKnown RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 ZMYND10O75800 440 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 FGFR3P22607 806 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 NMT1P30419 496 aaKnown RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 MCM4P33991 863 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 TXLNAP40222 546 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 VCPP55072 806 aaKnown RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 NTHL1P78549 312 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 SLC10A6Q3KNW5 377 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 PKDCCQ504Y2 493 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 ZBTB41Q5SVQ8 909 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 PDXDC1Q6P996 788 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 LILRA6Q6PI73 481 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 CD300LGQ6UXG3 332 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 ZPBP2Q6X784 338 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 GRASPQ7Z6J2 395 aaPredicted RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 FBXL6Q8N531 539 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 KCTD17Q8N5Z5 321 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 SLC7A14Q8TBB6 771 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 STAMQ92783 540 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 USP28Q96RU2 1077 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 MYADMQ96S97 322 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 PANK2Q9BZ23 570 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 CCSER1Q9C0I3 900 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 MFSD1Q9H3U5 465 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 WDR6Q9NNW5 1121 aaKnown RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 CCDC39Q9UFE4 941 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 KCNG1Q9UIX4 513 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 FBXO2Q9UK22 296 aaPredicted RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 TBX20Q9UMR3 447 aa9.46□□□□□ -0.9
RFX3-209ENST00000451859 KIF26AQ9ULI4 1882 aaPredicted RBP9.46□□□□□ -0.9
RFX3-209ENST00000451859 DENND4CQ5VZ89 1909 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 TICRRQ7Z2Z1 1910 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 TISP43B9A030 160 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 STX6O43752 255 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 NARSO43776 548 aaKnown RBP9.45□□□□□ -0.9
RFX3-209ENST00000451859 HSP90AA1P07900 732 aaKnown RBP9.45□□□□□ -0.9
RFX3-209ENST00000451859 KCNE1P15382 129 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 GUCY2FP51841 1108 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 PPP2R3AQ06190 1150 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 MCL1Q07820 350 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 STK38Q15208 465 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 XKR4Q5GH76 650 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 AXDND1Q5T1B0 1012 aaPredicted RBP9.45□□□□□ -0.9
RFX3-209ENST00000451859 RRAGBQ5VZM2 374 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 ALKAL1Q6UXT8 129 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
RFX3-209ENST00000451859 BMP8AQ7Z5Y6 402 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 SFR1Q86XK3 245 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 HSCBQ8IWL3 235 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 GPR65Q8IYL9 337 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 UBALD2Q8IYN6 164 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 PDILTQ8N807 584 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 KRI1Q8N9T8 703 aaKnown RBP9.45□□□□□ -0.9
RFX3-209ENST00000451859 SPRYD3Q8NCJ5 442 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 HDAC7Q8WUI4 952 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
RFX3-209ENST00000451859 MSTO1Q9BUK6 570 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 IKZF4Q9H2S9 585 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 KCNK12Q9HB15 430 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 ZDHHC7Q9NXF8 308 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 TBC1D7Q9P0N9 293 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 MTRRQ9UBK8 725 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 FBXL21Q9UKT6 434 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 OBSL1O75147 1896 aa9.45□□□□□ -0.9
RFX3-209ENST00000451859 LACTBL1A8MY62 500 aa9.44□□□□□ -0.9
RFX3-209ENST00000451859 ANKRD63C9JTQ0 380 aa9.44□□□□□ -0.9
RFX3-209ENST00000451859 PRRG1O14668 218 aa9.44□□□□□ -0.9
RFX3-209ENST00000451859 CLTAP09496 248 aa9.44□□□□□ -0.9
RFX3-209ENST00000451859 IDEP14735 1019 aa9.44□□□□□ -0.9
RFX3-209ENST00000451859 FSHRP23945 695 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms