RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LRRC20Q8TCA0 184 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SSH3Q8TE77 659 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 U2AF1L4Q8WU68 220 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 ATP6V1E2Q96A05 226 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PDCD10Q9BUL8 212 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CHID1Q9BWS9 393 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TMEM168Q9H0V1 697 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 EPB41L1Q9H4G0 881 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MARCH7Q9H992 704 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NMRK1Q9NWW6 199 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TMEM9Q9P0T7 183 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CRNNQ9UBG3 495 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 PALD1Q9ULE6 856 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 STX8Q9UNK0 236 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SLC8A2Q9UPR5 921 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CLIC4Q9Y696 253 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RPS6KL1Q9Y6S9 549 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZHX2Q9Y6X8 837 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MYO3BQ8WXR4 1341 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 JCADQ9P266 1359 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 DISP2A7MBM2 1401 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 EDC4Q6P2E9 1401 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 C15orf38-AP3S2A0A0A6YYH1 394 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CFAP69A5D8W1 941 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 A6NHS1 94 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 BTNL10A8MVZ5 291 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 KMOO15229 486 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 LPXNO60711 386 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MAGEC1O60732 1142 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SRGAP2O75044 1071 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NOS1APO75052 506 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 LYNP07948 512 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ENO2P09104 434 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 NUDT17P0C025 328 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SRGAP2CP0DJJ0 459 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SRGAP2BP0DMP2 458 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CCNB1P14635 433 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TSHRP16473 764 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NAT1P18440 290 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ARL1P40616 181 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 BPIFB4P59827 614 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 BNIP1Q12981 228 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 STX5Q13190 355 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ADAM9Q13443 819 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 LAMC2Q13753 1193 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NAB2Q15742 525 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 HADHQ16836 314 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 CAVIN4Q5BKX8 364 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RABGAP1LQ5R372 815 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 IFIT1BQ5T764 474 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 RINT1Q6NUQ1 792 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 APOA5Q6Q788 366 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 AHI1Q8N157 1196 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NOA1Q8NC60 698 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 FNDC8Q8TC99 324 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CERKQ8TCT0 537 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 HM13Q8TCT9 377 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ATL1Q8WXF7 558 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 KCNB2Q92953 911 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 FAM149B1Q96BN6 582 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ERLEC1Q96DZ1 483 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 XAGE2Q96GT9 111 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZFYVE19Q96K21 471 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 HNRNPABQ99729 332 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 TINF2Q9BSI4 451 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 DCLK3Q9C098 648 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TRABDQ9H4I3 376 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 C12orf4Q9NQ89 552 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 STK39Q9UEW8 545 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SLC24A2Q9UI40 661 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZBTB1Q9Y2K1 713 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PVALEFA0A1B0GWK0 134 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 HTR3EA5X5Y0 456 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TLR3O15455 904 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SNX3O60493 162 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 GAS7O60861 476 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SRP72O76094 671 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 AFPP02771 609 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 LDHBP07195 334 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SRGNP10124 158 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ANPEPP15144 967 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NPR1P16066 1061 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TARSP26639 723 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 IGHMBP2P38935 993 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 TUFMP49411 452 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SCNN1BP51168 640 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PRKAA2P54646 552 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TMPRSS15P98073 1019 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ECT2LQ008S8 904 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CTTNQ14247 550 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 TMTC4Q5T4D3 741 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 C6orf52Q5T4I8 152 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NEK5Q6P3R8 708 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ANGPTL8Q6UXH0 198 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RAB44Q7Z6P3 723 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 CABP7Q86V35 215 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 KIF2BQ8N4N8 673 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TSPAN14Q8NG11 270 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZNF420Q8TAQ5 688 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 CASKIN2Q8WXE0 1202 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms