RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 KAT5Q92993 513 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 HPDLQ96IR7 371 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 FAXDC2Q96IV6 333 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 KREMEN1Q96MU8 473 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 TMEM106CQ9BVX2 250 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 APOBEC3GQ9HC16 384 aaKnown RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 UBN1Q9NPG3 1134 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 SLC38A7Q9NVC3 462 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 ZSWIM8A7E2V4 1837 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 CASP8AP2Q9UKL3 1982 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 MGAMO43451 1857 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 RBAK-RBAKDNI3L0D1 243 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 KCNE1P15382 129 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 CD58P19256 250 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 PNPLA4P41247 253 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 ATN1P54259 1190 aaPredicted RBP10.38□□□□□ -0.75
RFC4-210ENST00000449502 IFI16Q16666 785 aaKnown RBP10.38□□□□□ -0.75
RFC4-210ENST00000449502 WDR72Q3MJ13 1102 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 GLRA4Q5JXX5 417 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 TAF3Q5VWG9 929 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 ALKBH5Q6P6C2 394 aaKnown RBP10.38□□□□□ -0.75
RFC4-210ENST00000449502 TMEM270Q6UE05 265 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 SCARA5Q6ZMJ2 495 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 SEPT8Q92599 483 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 ELMO3Q96BJ8 720 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 ZNF333Q96JL9 665 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 ZNF560Q96MR9 790 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 ALS2CR12Q96Q35 445 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 MMS19Q96T76 1030 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 ADAM2Q99965 735 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 FTHL17Q9BXU8 183 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 GPR88Q9GZN0 384 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 AGO3Q9H9G7 860 aaKnown RBP10.38□□□□□ -0.75
RFC4-210ENST00000449502 CYP3A43Q9HB55 503 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 DNAI1Q9UI46 699 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 GUCA1BQ9UMX6 200 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 GIT1Q9Y2X7 761 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 NUB1Q9Y5A7 615 aa10.38□□□□□ -0.75
RFC4-210ENST00000449502 A0A087X0T9 212 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 SMIM28A0A1B0GU29 152 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 TACC1O75410 805 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 LCA5LO95447 670 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 H2AFZP0C0S5 128 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 FAM228BP0C875 321 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 HSPA1AP0DMV8 641 aaKnown RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 HSPA1BP0DMV9 641 aaKnown RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 CYP11B1P15538 503 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 CAPN2P17655 700 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 CYP3A5P20815 502 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 CDK7P50613 346 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 GUCY2FP51841 1108 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 ETF1P62495 437 aaKnown RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 CDR2Q01850 454 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 NAB2Q15742 525 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 ASTE1Q2TB18 679 aaPredicted RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 ZNF569Q5MCW4 686 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 SYT10Q6XYQ8 523 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 SLC39A5Q6ZMH5 540 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 ZNF662Q6ZS27 426 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 FAM43BQ6ZT52 329 aaPredicted RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 NYAP1Q6ZVC0 841 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 H2AFVQ71UI9 128 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 ZNF677Q86XU0 584 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 FAM126BQ8IXS8 530 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 LRRC52Q8N7C0 313 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 RBBP8NLQ8NC74 664 aaPredicted RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 SMG8Q8ND04 991 aaKnown RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 SECISBP2LQ93073 1101 aaKnown RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 ARMC5Q96C12 935 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 CRISPLD2Q9H0B8 497 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 MYO1AQ9UBC5 1043 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 SIX4Q9UIU6 781 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 NAGPAQ9UK23 515 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 REXO2Q9Y3B8 237 aaKnown RBP10.37□□□□□ -0.75
RFC4-210ENST00000449502 PAXBP1Q9Y5B6 917 aa10.37□□□□□ -0.75
RFC4-210ENST00000449502 A0A0U1RQF3 1178 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 MACROD2A1Z1Q3 448 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 TMCO5BA8MYB1 307 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 DDX3XO00571 662 aaKnown RBP eCLIP10.36□□□□□ -0.756e-13■■■□□ 17.4
RFC4-210ENST00000449502 THAP12O43422 761 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 MED7O43513 233 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 PARNO95453 639 aaKnown RBP10.36□□□□□ -0.75
RFC4-210ENST00000449502 STAU1O95793 577 aaKnown RBP10.36□□□□□ -0.75
RFC4-210ENST00000449502 THP07101 528 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 WEE2P0C1S8 567 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 GNA15P30679 374 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 MLH1P40692 756 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 NOP2P46087 812 aaKnown RBP10.36□□□□□ -0.75
RFC4-210ENST00000449502 PPP1R2P3Q6NXS1 205 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 ALKAL1Q6UXT8 129 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 SLC47A2Q86VL8 602 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 ANKLE1Q8NAG6 615 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 URGCPQ8TCY9 931 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 CTNNBL1Q8WYA6 563 aaPredicted RBP10.36□□□□□ -0.75
RFC4-210ENST00000449502 APBB2Q92870 758 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms