RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 CASKIN2Q8WXE0 1202 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 USP6NLQ92738 828 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 CPB2Q96IY4 423 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 NUP85Q9BW27 656 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 MTMR12Q9C0I1 747 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 CDT1Q9H211 546 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ADAM21Q9UKJ8 722 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 GNEQ9Y223 722 aaKnown RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ANK1P16157 1881 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 COL1A2P08123 1366 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 GOLGA6BA6NDN3 693 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 TMEM110-MUSTN1A8MSY1 372 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 GGCXP38435 758 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 MESDQ14696 234 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 CLEC16AQ2KHT3 1053 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 TMEM130Q8N3G9 435 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 ZNF564Q8TBZ8 553 aaPredicted RBP17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 CENPFP49454 3210 aa17.22■□□□□ 0.35
AP000253.1-201ENST00000449339 CST3P01034 146 aaPredicted RBP17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 BPIFB4P59827 614 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 NNTQ13423 1086 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 CUL2Q13617 745 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 TRADDQ15628 312 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 AMHR2Q16671 573 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 ZNF677Q86XU0 584 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 UBL4BQ8N7F7 174 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 NAP1L3Q99457 506 aaPredicted RBP17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 UVRAGQ9P2Y5 699 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 NUB1Q9Y5A7 615 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 AGPSO00116 658 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 GPR25O00155 361 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 HOXC6P09630 235 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 ACO1P21399 889 aaKnown RBP17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 COMTP21964 271 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 TMOD1P28289 359 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 TMEM62Q0P6H9 643 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 ZNF211Q13398 564 aaPredicted RBP17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 NCOA4Q13772 614 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 TLK2Q86UE8 772 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 KIAA0319LQ8IZA0 1049 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 KRT35Q92764 455 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 SLITRK6Q9H5Y7 841 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 AMACRQ9UHK6 382 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 TNFSF13BQ9Y275 285 aa17.21■□□□□ 0.35
AP000253.1-201ENST00000449339 A6NJR5 290 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 RNF40O75150 1001 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 FAM153BP0C7A2 387 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 UNGP13051 313 aaPredicted RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 FGFR4P22455 802 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 NOP14P78316 857 aaKnown RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 FAM153CQ494X1 144 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 WDR49Q8IV35 697 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 EFCAB13Q8IY85 973 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 RIN2Q8WYP3 895 aaPredicted RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 KAT2BQ92831 832 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 ZSWIM1Q9BR11 485 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 ZFYVE28Q9HCC9 887 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 PRMT7Q9NVM4 692 aaPredicted RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 FAM153AQ9UHL3 310 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 NR2E1Q9Y466 385 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 TLL2Q9Y6L7 1015 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 CXCL8P10145 99 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 MARCKSL1P49006 195 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 TFAMQ00059 246 aaKnown RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 BEX3Q00994 111 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 CLUL1Q15846 466 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 NAA35Q5VZE5 725 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 MAATS1Q7Z4T9 603 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 TSEN2Q8NCE0 465 aaKnown RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 CCDC26Q8TAB7 109 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 BTBD6Q96KE9 485 aa17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 FAM49AQ9H0Q0 323 aaPredicted RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 CNOT8Q9UFF9 292 aaKnown RBP17.2■□□□□ 0.34
AP000253.1-201ENST00000449339 TNPO2O14787 897 aaKnown RBP17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 CLTAP09496 248 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 TBXAS1P24557 533 aaPredicted RBP17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 RGS2P41220 211 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 AP3M2P53677 418 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 MYL6P60660 151 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 TMEM270Q6UE05 265 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 WNT8AQ9H1J5 351 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 PDZD7Q9H5P4 517 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 GINS2Q9Y248 185 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 TRIP12Q14669 1992 aaPredicted RBP17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 MEFVO15553 781 aaPredicted RBP17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 SMIM10L2AP0DMW4 78 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 SMIM10L2BP0DMW5 78 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 ARF4P18085 180 aaPredicted RBP17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 SSTR3P32745 418 aaPredicted RBP17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 PEX5P50542 639 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 POU5F1BQ06416 359 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 CUL1Q13616 776 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 HIC1Q14526 733 aa17.19■□□□□ 0.34
AP000253.1-201ENST00000449339 FAM187BQ17R55 369 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms