RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ARHGEF7Q14155 803 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MFN1Q8IWA4 741 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SAMD3Q8N6K7 520 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ZDHHC15Q96MV8 337 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SLITRK1Q96PX8 696 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 LRRC37BQ96QE4 947 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 PPP2R3BQ9Y5P8 575 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 GPR182O15218 404 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 GYS1P13807 737 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 HARS2P49590 506 aaKnown RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 SESN2P58004 480 aaPredicted RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 PPP2R2AP63151 447 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 MAPRE1Q15691 268 aaKnown RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 ZNF484Q5JVG2 852 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 ZNF677Q86XU0 584 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 DDIASQ8IXT1 998 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 CXorf38Q8TB03 319 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 NIF3L1Q9GZT8 377 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 ITIH6Q6UXX5 1313 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 KCNA2P16389 499 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 ALDH7A1P49419 539 aaKnown RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 STAT4Q14765 748 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 GRAMD1BQ3KR37 738 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 TEKT4Q8WW24 435 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 HPDLQ96IR7 371 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 KLHL11Q9NVR0 708 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 PIK3C2BO00750 1634 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 ODC1P11926 461 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 EPHX2P34913 555 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 AARSP49588 968 aaKnown RBP eCLIP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 PDIA6Q15084 440 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 GOLGA7BQ2TAP0 167 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 FBXO38Q6PIJ6 1188 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 ARHGEF26Q96DR7 871 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 TSPAN17Q96FV3 270 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 SLC30A1Q9Y6M5 507 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 A0A1B0GTH6 734 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 TLR2O60603 784 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 LRG1P02750 347 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 THPOP40225 353 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 GALCP54803 685 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 HIBCHQ6NVY1 386 aaPredicted RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 SLC7A14Q8TBB6 771 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 PABPC5Q96DU9 382 aaKnown RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 KIFC3Q9BVG8 833 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 FAM49BQ9NUQ9 324 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 UBQLN1Q9UMX0 589 aaKnown RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 AKT1P31749 480 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 BACE1P56817 501 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 MEI1Q5TIA1 1274 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 TDRD10Q5VZ19 366 aaKnown RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 PIP4K2CQ8TBX8 421 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 PRMT6Q96LA8 375 aaPredicted RBP10.72□□□□□ -0.69
SCN10A-201ENST00000449082 AGAP3Q96P47 875 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 UNC45AQ9H3U1 944 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 TEKT2Q9UIF3 430 aa10.72□□□□□ -0.69
SCN10A-201ENST00000449082 CPS1P31327 1500 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 TADA3O75528 432 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 HAUS5O94927 633 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 ATP1A1P05023 1023 aaKnown RBP10.71□□□□□ -0.69
SCN10A-201ENST00000449082 PNMA6AP0CW24 399 aaPredicted RBP10.71□□□□□ -0.69
SCN10A-201ENST00000449082 ARFIP2P53365 341 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 STK4Q13043 487 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 MAPRE2Q15555 327 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 UGP2Q16851 508 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 NDE1Q9NXR1 346 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 POLLQ9UGP5 575 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 DOLKQ9UPQ8 538 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 AGLP35573 1532 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 H7C4K7 107 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 SYF2O95926 243 aaKnown RBP10.71□□□□□ -0.69
SCN10A-201ENST00000449082 FAM200BP0CF97 657 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 GFAPP14136 432 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 GGCXP38435 758 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 CCDC15Q0P6D6 951 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 TRADDQ15628 312 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 CATSPER3Q86XQ3 398 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 USP33Q8TEY7 942 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 RUBCNQ92622 972 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 CLMNQ96JQ2 1002 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 TMEM117Q9H0C3 514 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 NDUFS3O75489 264 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 RPLP2P05387 115 aaKnown RBP10.71□□□□□ -0.69
SCN10A-201ENST00000449082 GPD1P21695 349 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 GCKP35557 465 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 CCDC144BQ3MJ40 725 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 HIPK4Q8NE63 616 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 SCOCQ9UIL1 159 aa10.71□□□□□ -0.69
SCN10A-201ENST00000449082 ESYT3A0FGR9 886 aa10.71□□□□□ -0.7
SCN10A-201ENST00000449082 DCDC2CA8MYV0 355 aa10.71□□□□□ -0.7
SCN10A-201ENST00000449082 CYP11B2P19099 503 aa10.71□□□□□ -0.7
SCN10A-201ENST00000449082 ATICP31939 592 aa10.71□□□□□ -0.7
SCN10A-201ENST00000449082 PDK1Q15118 436 aa10.71□□□□□ -0.7
SCN10A-201ENST00000449082 SMAD1Q15797 465 aaKnown RBP10.71□□□□□ -0.7
SCN10A-201ENST00000449082 TGS1Q96RS0 853 aaKnown RBP10.71□□□□□ -0.7
SCN10A-201ENST00000449082 SENP1Q9P0U3 644 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms