RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TULP1O00294 542 aaPredicted RBP15.84■□□□□ 0.13
USP39-206ENST00000448971 TMC5Q6UXY8 1006 aa15.84■□□□□ 0.13
USP39-206ENST00000448971 NOC3LQ8WTT2 800 aaKnown RBP15.84■□□□□ 0.13
USP39-206ENST00000448971 PAGE5Q96GU1 130 aa15.84■□□□□ 0.13
USP39-206ENST00000448971 ZMAT2Q96NC0 199 aaKnown RBP15.84■□□□□ 0.13
USP39-206ENST00000448971 STRA6Q9BX79 667 aa15.84■□□□□ 0.13
USP39-206ENST00000448971 EMILIN2Q9BXX0 1053 aa15.84■□□□□ 0.13
USP39-206ENST00000448971 EXOC1Q9NV70 894 aa15.84■□□□□ 0.13
USP39-206ENST00000448971 AGO2Q9UKV8 859 aaKnown RBP15.84■□□□□ 0.13
USP39-206ENST00000448971 DENND4AQ7Z401 1863 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 FAM189A1O60320 539 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 LILRB3O75022 631 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 B3GAT3O94766 335 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 KCNE1P15382 129 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 NPR3P17342 541 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 CLCNKBP51801 687 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 SOX4Q06945 474 aaPredicted RBP15.83■□□□□ 0.12
USP39-206ENST00000448971 SPAG1Q07617 926 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 POSTNQ15063 836 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 SLC10A6Q3KNW5 377 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 XKR4Q5GH76 650 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 ARMCX5Q6P1M9 558 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 ALKAL1Q6UXT8 129 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 GPR149Q86SP6 731 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 GLIS3Q8NEA6 775 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 KIF12Q96FN5 646 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 CCDC34Q96HJ3 373 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 B3GALT6Q96L58 329 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 GPR62Q9BZJ7 368 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 PLEKHA5Q9HAU0 1116 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 TUBGCP4Q9UGJ1 667 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 SSX2IPQ9Y2D8 614 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 UBE4BO95155 1302 aa15.83■□□□□ 0.12
USP39-206ENST00000448971 FAM237AA0A1B0GTK4 181 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 PVALEFA0A1B0GWK0 134 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 PODXLO00592 558 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 EIF3DO15371 548 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP39-206ENST00000448971 MEFVO15553 781 aaPredicted RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 XPOTO43592 962 aaKnown RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 PI15O43692 258 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 MYL1P05976 194 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 ACOT2P49753 483 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 FOXK2Q01167 660 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 ELAVL2Q12926 359 aaKnown RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 ENOX2Q16206 610 aaKnown RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 USP41Q3LFD5 358 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 CWF19L1Q69YN2 538 aaKnown RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 KRBA2Q6ZNG9 492 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 PPFIBP1Q86W92 1011 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 CEP57Q86XR8 500 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 NELFCDQ8IXH7 590 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 RNF168Q8IYW5 571 aaPredicted RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 CCDC47Q96A33 483 aaKnown RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 C18orf25Q96B23 403 aaPredicted RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 SAAL1Q96ER3 474 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 KLHL5Q96PQ7 755 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 CPSF3Q9UKF6 684 aaKnown RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 UBQLN1Q9UMX0 589 aaKnown RBP15.82■□□□□ 0.12
USP39-206ENST00000448971 NUB1Q9Y5A7 615 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 STYXL1Q9Y6J8 313 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 TCHHQ07283 1943 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 C2orf16Q68DN1 1984 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 CITO14578 2027 aa15.82■□□□□ 0.12
USP39-206ENST00000448971 TTC26A0AVF1 554 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 TMEM189-UBE2V1I3L0A0 370 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 CACNA1AO00555 2505 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 CLCN4P51793 760 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 DSG1Q02413 1049 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 UPP1Q16831 310 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 FAM171A1Q5VUB5 890 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 TAS1R1Q7RTX1 841 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 FRMD5Q7Z6J6 570 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 CD302Q8IX05 232 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 RIN2Q8WYP3 895 aaPredicted RBP15.81■□□□□ 0.12
USP39-206ENST00000448971 DDX27Q96GQ7 796 aaKnown RBP15.81■□□□□ 0.12
USP39-206ENST00000448971 CBWD1Q9BRT8 395 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 FAM213AQ9BRX8 229 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 MFSD1Q9H3U5 465 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 SLC39A2Q9NP94 309 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 CHMP5Q9NZZ3 219 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.81■□□□□ 0.12
USP39-206ENST00000448971 DMXL1Q9Y485 3027 aa15.81■□□□□ 0.12
USP39-206ENST00000448971 FRYLO94915 3013 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 LACTBL1A8MY62 500 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 ZNF202O95125 648 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 LDHAP00338 332 aaKnown RBP15.8■□□□□ 0.12
USP39-206ENST00000448971 ADH1AP07327 375 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 NFICP08651 508 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 CNPP09543 421 aaKnown RBP15.8■□□□□ 0.12
USP39-206ENST00000448971 AOC1P19801 751 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 GARTP22102 1010 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 KLRC2P26717 231 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 ADSSP30520 456 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 MCM4P33991 863 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 CREMQ03060 361 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 EHHADHQ08426 723 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 TDGQ13569 410 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 KMT5BQ4FZB7 885 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 RTP2Q5QGT7 225 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 JADE1Q6IE81 842 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms