RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ERLIN1O75477 346 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 FTCDO95954 541 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 ASS1P00966 412 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 VTNP04004 478 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 SMIM10L2AP0DMW4 78 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 SMIM10L2BP0DMW5 78 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 GNAT1P11488 350 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 AKR1A1P14550 325 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 ABCB4P21439 1286 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 WNT7BP56706 349 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 FMO1Q01740 532 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 CLUL1Q15846 466 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 DCAF4L1Q3SXM0 396 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 MARCH8Q5T0T0 291 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 FBXO38Q6PIJ6 1188 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 TMCO3Q6UWJ1 677 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 DAAM2Q86T65 1068 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 NT5DC4Q86YG4 428 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 CREG2Q8IUH2 290 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 CD302Q8IX05 232 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 KIAA0319LQ8IZA0 1049 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 RUBCNQ92622 972 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 PBXIP1Q96AQ6 731 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 MINDY3Q9H8M7 445 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 AMFRQ9UKV5 643 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 CNTN6Q9UQ52 1028 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 TARSL2A2RTX5 802 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MBLAC1A4D2B0 266 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 CCDC151A5D8V7 595 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 ADCY6O43306 1168 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 KIF4AO95239 1232 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 IGHA2P01877 340 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MYBL1P10243 752 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 CHRNB2P17787 502 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 CYP2C19P33261 490 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 PSEN2P49810 448 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 TFAMQ00059 246 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 TAF3Q5VWG9 929 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MFSD14CQ5VZR4 134 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 EEF1DP3Q658K8 133 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 ACAD10Q6JQN1 1059 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 ZBTB10Q96DT7 871 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF668Q96K58 619 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 PARD6BQ9BYG5 372 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MTMR12Q9C0I1 747 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 THAP2Q9H0W7 228 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 PDZD7Q9H5P4 517 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 SETD4Q9NVD3 440 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 CTTNBP2NLQ9P2B4 639 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 UVRAGQ9P2Y5 699 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 PCDHB4Q9Y5E5 795 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 A0A1B0GUA9 196 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 HAS3O00219 553 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF185O15231 689 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 NCK2O43639 380 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 DUSP11O75319 330 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MTA2O94776 668 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MMEP08473 750 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 STAG3L1P0CL83 205 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 CYP2C9P11712 490 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 ARF4P18085 180 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 AXLP30530 894 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 CCL14Q16627 93 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 C11orf63Q6NUN7 778 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MMGT1Q8N4V1 131 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 COG1Q8WTW3 980 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 DDX1Q92499 740 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 NIF3L1Q9GZT8 377 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 FAM124BQ9H5Z6 455 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 APOBEC3GQ9HC16 384 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 TAS2R14Q9NYV8 317 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 GTF3C4Q9UKN8 822 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 RAB21Q9UL25 225 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 NUB1Q9Y5A7 615 aa11.31□□□□□ -0.6
VIPAS39-203ENST00000448935 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 GPR25O00155 361 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 TSPAN1O60635 241 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 MYL3P08590 195 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 IQCF3P0C7M6 154 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 CXCL8P10145 99 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 P4HA1P13674 534 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ZSCAN20P17040 1043 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ACO1P21399 889 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 GNA15P30679 374 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ATICP31939 592 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 OSTNP61366 133 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF699Q32M78 642 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 GLE1Q53GS7 698 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 SPOPLQ6IQ16 392 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms