RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 HSD17B4P51659 736 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 FAPQ12884 760 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 CCNIQ14094 377 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 LINS1Q8NG48 757 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 PPP2R3CQ969Q6 453 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 RRAGDQ9NQL2 400 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 KMT5AQ9NQR1 393 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 USP15Q9Y4E8 981 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 AREL1O15033 823 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 PGK2P07205 417 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 UBA1P22314 1058 aaKnown RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 CHMLP26374 656 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 SERPINB9P50453 376 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 VBP1P61758 197 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 LRRC63Q05C16 580 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 RBBP4Q09028 425 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 OR6B2Q6IFH4 312 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 TAS2R42Q7RTR8 314 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 BNIPLQ7Z465 357 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 TTC30AQ86WT1 665 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 PKP3Q9Y446 797 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 TRPC5OSA6NMA1 111 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 STX16-NPEPL1H3BU86 382 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 STX16O14662 325 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 PFKFB2O60825 505 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 CCNA2P20248 432 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 SOAT1P35610 550 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 MXI1P50539 228 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 KRT31Q15323 416 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 UGT3A1Q6NUS8 523 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 FAR2Q96K12 515 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC115Q96NT0 180 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 FRMD8Q9BZ67 464 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 MCUBQ9NWR8 336 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 HSPBP1Q9NZL4 362 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 NDUFB5O43674 189 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 CYP2C19P33261 490 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF280BQ86YH2 543 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 ATP6V1G3Q96LB4 118 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 PCDHA13Q9Y5I0 950 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 A0A087X0T9 212 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 RAD51BO15315 384 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 TIMM44O43615 452 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 GYS1P13807 737 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 ATF6P18850 670 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 BICRALQ6AI39 1079 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 FAM133AQ8N9E0 248 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 AP3S1Q92572 193 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 UBE2TQ9NPD8 197 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 ARPP21Q9UBL0 812 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 HEY1Q9Y5J3 304 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 RP1L1Q8IWN7 2480 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 TCP11X1B4DZS4 312 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 FAUP35544 74 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 NPY2RP49146 381 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ACTR2P61160 394 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 P3H1Q32P28 736 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CACHD1Q5VU97 1274 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 LRRC6Q86X45 466 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CDKL3Q8IVW4 592 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 LRRC17Q8N6Y2 441 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 XXYLT1Q8NBI6 393 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 C3orf20Q8ND61 904 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CENPIQ92674 756 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 C6orf62Q9GZU0 229 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SSH2Q76I76 1423 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 A0A0G2JPF8 293 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 HNRNPCL3B7ZW38 293 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 F8VZ95 297 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 NDUFA10O95299 355 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 HNRNPCL4P0DMR1 293 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ALOX15P16050 662 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 C21orf59P57076 290 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 GPS1Q13098 491 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 PWP1Q13610 501 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 MFSD4BQ5TF39 518 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CHERPQ8IWX8 916 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 AKAP1Q92667 903 aaKnown RBP eCLIP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 MIEF2Q96C03 454 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 KIAA1586Q9HCI6 787 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 C12orf4Q9NQ89 552 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 XPR1Q9UBH6 696 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 TRMT6Q9UJA5 497 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 AHCYL1O43865 530 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SPAG6O75602 509 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 MYL2P10916 166 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 TTKP33981 857 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 USP14P54578 494 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ABATP80404 500 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 NFYCQ13952 458 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 HAUS6Q7Z4H7 955 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ADCK2Q7Z695 626 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF507Q8TCN5 953 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CCDC126Q96EE4 140 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 PHB2Q99623 299 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms