RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 TBX3O15119 743 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 MOCS2O96007 188 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-204ENST00000448183 KRT16P08779 473 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 AKR1B1P15121 316 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-204ENST00000448183 S100A5P33763 92 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 HSD17B3P37058 310 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 ITGA8P53708 1063 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 FOXO4P98177 505 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 CDK17Q00537 523 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 DMC1Q14565 340 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 STILQ15468 1287 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 RBBP7Q16576 425 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 KYAT1Q16773 422 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 BTNL9Q6UXG8 535 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 PLD3Q8IV08 490 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 APLFQ8IW19 511 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-204ENST00000448183 PPHLN1Q8NEY8 458 aaKnown RBP8.17□□□□□ -1.1
NEDD9-204ENST00000448183 ENGASEQ8NFI3 743 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 MYCBPAPQ8TBZ2 947 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 CPA5Q8WXQ8 436 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 MASTLQ96GX5 879 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 PPP1R36Q96LQ0 422 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 ZNF560Q96MR9 790 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 SERPINB12Q96P63 405 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 CCT7Q99832 543 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 REEP2Q9BRK0 252 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 MOV10L1Q9BXT6 1211 aaKnown RBP8.17□□□□□ -1.1
NEDD9-204ENST00000448183 NEUROG2Q9H2A3 272 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 PAK5Q9P286 719 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
NEDD9-204ENST00000448183 GRID1Q9ULK0 1009 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 ZNF609O15014 1411 aa8.17□□□□□ -1.1
NEDD9-204ENST00000448183 TRPM1Q7Z4N2 1603 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 MYO3BQ8WXR4 1341 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 PJA2O43164 708 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 HSPA1AP0DMV8 641 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 HSPA1BP0DMV9 641 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 H2AFXP16104 143 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 SPRP35270 261 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 KCNJ1P48048 391 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 GPSM2P81274 684 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 CENPCQ03188 943 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 ZNF235Q14590 738 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 RTKN2Q8IZC4 609 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 ASIC4Q96FT7 647 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 TSPAN17Q96FV3 270 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 OTUB1Q96FW1 271 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 CLMNQ96JQ2 1002 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 TNIP3Q96KP6 325 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 MKNK1Q9BUB5 465 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 NPHP4O75161 1426 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 LRRIQ3A6PVS8 624 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 PSMD3O43242 534 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 HNRNPRO43390 633 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 SRP72O76094 671 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 UBTFL6P0CB48 400 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 ATXN8OSP0DMR3 200 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 YWHABP31946 246 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 TMED10P49755 219 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 TPI1P60174 286 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 USP10Q14694 798 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 TAS2R42Q7RTR8 314 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 ATG9AQ7Z3C6 839 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 IFNEQ86WN2 208 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 GALNT4Q8N4A0 578 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 STX19Q8N4C7 294 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 USP6NLQ92738 828 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 KRT35Q92764 455 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 E2F7Q96AV8 911 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 PNKPQ96T60 521 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 KLF6Q99612 283 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 PABPC3Q9H361 631 aaKnown RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 DNAJC5Q9H3Z4 198 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 MANSC1Q9H8J5 431 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 C20orf96Q9NUD7 363 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 KCND2Q9NZV8 630 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 PLAGL2Q9UPG8 496 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 PCDHB2Q9Y5E7 798 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 CDY2AQ9Y6F7 541 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 CDY1Q9Y6F8 540 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 LAMC1P11047 1609 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 PLEKHG2Q9H7P9 1386 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 LMTK2Q8IWU2 1503 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 TBC1D4O60343 1298 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 DGAT1O75907 488 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 WDR47O94967 919 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 HMOX2P30519 316 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 COBLL1Q53SF7 1204 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 TEX2Q8IWB9 1127 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 LRRC34Q8IZ02 419 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 NUP93Q8N1F7 819 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 RBBP8NLQ8NC74 664 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 KIF12Q96FN5 646 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 FAM84BQ96KN1 310 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-204ENST00000448183 AGAP3Q96P47 875 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 CDC42BPAQ5VT25 1732 aa8.16□□□□□ -1.1
NEDD9-204ENST00000448183 M0R3G1 203 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms