RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 KANSL3Q9P2N6 904 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 FBXL5Q9UKA1 691 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 DAAM1Q9Y4D1 1078 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 FHOD1Q9Y613 1164 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 AKR1B15C9JRZ8 316 aaPredicted RBP21.01■□□□□ 0.95
SGCE-207ENST00000447873 UPP2O95045 317 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 ATICP31939 592 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 GSDMDP57764 484 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 C9orf57Q5W0N0 161 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 IQCEQ6IPM2 695 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 RRAGAQ7L523 313 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 OTOP2Q7RTS6 562 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 CNGA4Q8IV77 575 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 PPM1KQ8N3J5 372 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 TAF4BQ92750 862 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 ELMO3Q96BJ8 720 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 LBHD1Q9BQE6 289 aaPredicted RBP21.01■□□□□ 0.95
SGCE-207ENST00000447873 GOLGA2P5Q9HBQ8 144 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 DNAJC12Q9UKB3 198 aa21.01■□□□□ 0.95
SGCE-207ENST00000447873 RNF225M0QZC1 329 aaPredicted RBP21■□□□□ 0.95
SGCE-207ENST00000447873 FGBP02675 491 aa21■□□□□ 0.95
SGCE-207ENST00000447873 ADKP55263 362 aaKnown RBP21■□□□□ 0.95
SGCE-207ENST00000447873 MYO1EQ12965 1108 aa21■□□□□ 0.95
SGCE-207ENST00000447873 RAPGEF1Q13905 1077 aa21■□□□□ 0.95
SGCE-207ENST00000447873 NAB2Q15742 525 aa21■□□□□ 0.95
SGCE-207ENST00000447873 SPOPLQ6IQ16 392 aa21■□□□□ 0.95
SGCE-207ENST00000447873 C16orf59Q7L2K0 433 aa21■□□□□ 0.95
SGCE-207ENST00000447873 ARHGEF19Q8IW93 802 aa21■□□□□ 0.95
SGCE-207ENST00000447873 TATDN2Q93075 761 aa21■□□□□ 0.95
SGCE-207ENST00000447873 HPDLQ96IR7 371 aa21■□□□□ 0.95
SGCE-207ENST00000447873 FAM81BQ96LP2 452 aa21■□□□□ 0.95
SGCE-207ENST00000447873 XYLT2Q9H1B5 865 aa21■□□□□ 0.95
SGCE-207ENST00000447873 MFAP3LO75121 409 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 LRPAP1P30533 357 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 KRT9P35527 623 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 DEKP35659 375 aaKnown RBP20.99■□□□□ 0.95
SGCE-207ENST00000447873 KCNJ6P48051 423 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 WDR5P61964 334 aaKnown RBP20.99■□□□□ 0.95
SGCE-207ENST00000447873 ZBED6P86452 979 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 RNASELQ05823 741 aaKnown RBP20.99■□□□□ 0.95
SGCE-207ENST00000447873 GOLGA8FQ08AF8 430 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 GOLGA8DPQ0D2H9 430 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 PSRC1Q6PGN9 363 aaPredicted RBP20.99■□□□□ 0.95
SGCE-207ENST00000447873 ZNF365Q70YC5 407 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 SPAG5Q96R06 1193 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 NAA15Q9BXJ9 866 aaKnown RBP20.99■□□□□ 0.95
SGCE-207ENST00000447873 APOBEC3GQ9HC16 384 aaKnown RBP20.99■□□□□ 0.95
SGCE-207ENST00000447873 NUB1Q9Y5A7 615 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 SCN1AP35498 2009 aa20.99■□□□□ 0.95
SGCE-207ENST00000447873 FNDC1Q4ZHG4 1894 aaPredicted RBP20.98■□□□□ 0.95
SGCE-207ENST00000447873 ANO9A1A5B4 782 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 ZBBXA8MT70 800 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 PIRO00625 290 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 MFAP3P55082 362 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 TUSC3Q13454 348 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 WDR72Q3MJ13 1102 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 ZNF667Q5HYK9 610 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 ENOSF1Q7L5Y1 443 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 LRRC52Q8N7C0 313 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 RSPH1Q8WYR4 309 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 TOP1MTQ969P6 601 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 ZNF560Q96MR9 790 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 CASD1Q96PB1 797 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 STK33Q9BYT3 514 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 TBC1D13Q9NVG8 400 aa20.98■□□□□ 0.95
SGCE-207ENST00000447873 AJAP1Q9UKB5 411 aaPredicted RBP20.98■□□□□ 0.95
SGCE-207ENST00000447873 PPEF2O14830 753 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 STAU1O95793 577 aaKnown RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 RPL9P32969 192 aaKnown RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 PNPLA4P41247 253 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 GATMP50440 423 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 DEFB103AP81534 67 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 GCNT1Q02742 428 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 ARHGAP44Q17R89 818 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 TC2NQ8N9U0 490 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 BAP1Q92560 729 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 FAM193BQ96PV7 902 aaPredicted RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 MRPL9Q9BYD2 267 aaKnown RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 NIF3L1Q9GZT8 377 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 VRTNQ9H8Y1 702 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 NXF1Q9UBU9 619 aaKnown RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 NR2E3Q9Y5X4 410 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 CASTOR2A6NHX0 329 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 LRRC53A6NM62 1247 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 TBKBP1A7MCY6 615 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 P4HA1P13674 534 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 TBXAS1P24557 533 aaPredicted RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 CLCNKBP51801 687 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 EPHB4P54760 987 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 CUL2Q13617 745 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 ARID5BQ14865 1188 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 TSR1Q2NL82 804 aaKnown RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 TMEM240Q5SV17 173 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 OR8K1Q8NGG5 319 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 KAT5Q92993 513 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 DDX27Q96GQ7 796 aaKnown RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 NUCKS1Q9H1E3 243 aaKnown RBP20.97■□□□□ 0.95
SGCE-207ENST00000447873 ABHD10Q9NUJ1 306 aa20.97■□□□□ 0.95
SGCE-207ENST00000447873 PODXLO00592 558 aa20.96■□□□□ 0.95
SGCE-207ENST00000447873 DRAP1Q14919 205 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms