RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MAN2A2P49641 1150 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 FLT3LGP49771 235 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 GALK1P51570 392 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 ARFIP2P53365 341 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 POLE2P56282 527 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 PER3P56645 1201 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 SOX8P57073 446 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 RTP1P59025 263 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 TSPY1Q01534 308 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 PFKPQ01813 784 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 UBE3AQ05086 875 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 SLC13A2Q13183 592 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 SLC14A2Q15849 920 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 CDC37Q16543 378 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 HAUS3Q68CZ6 603 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 OGFOD2Q6N063 350 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 NFXL1Q6ZNB6 911 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 CCDC129Q6ZRS4 1044 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 UNC13DQ70J99 1090 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 HERC6Q8IVU3 1022 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 CCDC117Q8IWD4 279 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 FAM181AQ8N9Y4 354 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 GLIS1Q8NBF1 620 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 NETO2Q8NC67 525 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 ARRDC4Q8NCT1 418 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 NUP43Q8NFH3 380 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 TDRD7Q8NHU6 1098 aaKnown RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 CCHCR1Q8TD31 782 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 AFG1LQ8WV93 481 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 IPCEF1Q8WWN9 437 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 THAP4Q8WY91 577 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 RFFLQ8WZ73 363 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 HOXB13Q92826 284 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 ZUFSPQ96AP4 578 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 HVCN1Q96D96 273 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 EID2BQ96D98 161 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 COG8Q96MW5 612 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 PRPF18Q99633 342 aaKnown RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 FDXACB1Q9BRP7 624 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 CCDC68Q9H2F9 335 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 MRPL46Q9H2W6 279 aaKnown RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 MKNK2Q9HBH9 465 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 KRT84Q9NSB2 600 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 TBC1D23Q9NUY8 699 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 RGL1Q9NZL6 768 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 KCMF1Q9P0J7 381 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 ORC3Q9UBD5 711 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 ZNF212Q9UDV6 495 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 HERC5Q9UII4 1024 aaKnown RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 FRMD4BQ9Y2L6 1034 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 SIT1Q9Y3P8 196 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 PAXBP1Q9Y5B6 917 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
PMS1-216ENST00000447734 U3KQE9 123 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 RPTORQ8N122 1335 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 BTN3A1O00481 513 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 USO1O60763 962 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 PRAMEF4O60810 478 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 CUTAO60888 179 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 PHF2O75151 1096 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 USP2O75604 605 aaPredicted RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 FAM155BO75949 473 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 AHSGP02765 367 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 SLC3A2P08195 630 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 MSL3P1P0C860 447 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 RARBP10826 455 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 IDEP14735 1019 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 CST5P28325 142 aaPredicted RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 PRDX5P30044 214 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 STAT1P42224 750 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 KIR2DL1P43626 348 aaPredicted RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 KIR2DL2P43627 348 aaPredicted RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 SLC6A9P48067 706 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 CASP6P55212 293 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 MEF2AQ02078 507 aaPredicted RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 MVKQ03426 396 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 NFATC3Q12968 1075 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 SLC12A1Q13621 1099 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 RAB32Q13637 225 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 PSMD6Q15008 389 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 ARHGAP15Q53QZ3 475 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 ARL6IP4Q66PJ3 421 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 INTS5Q6P9B9 1019 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 LRSAM1Q6UWE0 723 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 CEP128Q6ZU80 1094 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 CLEC10AQ8IUN9 316 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 ABI1Q8IZP0 508 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 FBXL6Q8N531 539 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 ZMIZ2Q8NF64 920 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 WDR48Q8TAF3 677 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 IFI44Q8TCB0 444 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 ATP6V1E2Q96A05 226 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 CYFIP2Q96F07 1278 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 ZMAT2Q96NC0 199 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 UHRF1Q96T88 793 aaPredicted RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 GDF15Q99988 308 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 FAM83CQ9BQN1 747 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 G6PC3Q9BUM1 346 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 AMNQ9BXJ7 453 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 DPH1Q9BZG8 443 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms