RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 SETSIPP0DME0 302 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 RXRBP28702 533 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 ARFIP2P53365 341 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 HADHBP55084 474 aaKnown RBP16.97■□□□□ 0.31
CNOT3-204ENST00000447684 INHBCP55103 352 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 CAV1Q03135 178 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 FASTKD3Q14CZ7 662 aaKnown RBP16.97■□□□□ 0.31
CNOT3-204ENST00000447684 GSTA3Q16772 222 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
CNOT3-204ENST00000447684 ACBD5Q5T8D3 534 aaPredicted RBP16.97■□□□□ 0.31
CNOT3-204ENST00000447684 PCNX4Q63HM2 1172 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 ADGRF4Q8IZF3 695 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 ST13P4Q8IZP2 240 aaPredicted RBP16.97■□□□□ 0.31
CNOT3-204ENST00000447684 SLC25A41Q8N5S1 370 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 CFAP57Q96MR6 1250 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 NR1H4Q96RI1 486 aaPredicted RBP16.97■□□□□ 0.31
CNOT3-204ENST00000447684 GRIK5Q16478 980 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 P3H1Q32P28 736 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 CCDC24Q8N4L8 307 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 TRIM55Q9BYV6 548 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 KANSL3Q9P2N6 904 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 CHMP2BQ9UQN3 213 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
CNOT3-204ENST00000447684 ARFGEF1Q9Y6D6 1849 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 FSCN2O14926 492 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 PRPF4O43172 522 aaKnown RBP eCLIP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 SLC26A4O43511 780 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 SORBS3O60504 671 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 CLK2P49760 499 aaKnown RBP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 CDK7P50613 346 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 NR1H3Q13133 447 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 C16orf86Q6ZW13 317 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 PTCD3Q96EY7 689 aaKnown RBP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 CLPTM1LQ96KA5 538 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 PLEKHG4BQ96PX9 1271 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 DCLK3Q9C098 648 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 JMJD4Q9H9V9 463 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 H3BRJ5 948 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 GCAP28676 217 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 EAPPQ56P03 285 aaPredicted RBP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 PPP1R18Q6NYC8 613 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 MARK2Q7KZI7 788 aaKnown RBP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 SPATA24Q86W54 205 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 LRRC6Q86X45 466 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 DNAJC1Q96KC8 554 aaKnown RBP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 ECSITQ9BQ95 431 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 MAK16Q9BXY0 300 aaKnown RBP16.96■□□□□ 0.31
CNOT3-204ENST00000447684 NDE1Q9NXR1 346 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 CLIC5Q9NZA1 410 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 ANAPC7Q9UJX3 599 aa16.96■□□□□ 0.31
CNOT3-204ENST00000447684 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 CYP26A1O43174 497 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 RNASEH1O60930 286 aaKnown RBP16.95■□□□□ 0.3
CNOT3-204ENST00000447684 ATP6V1G1O75348 118 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 MAP7Q14244 749 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 DBN1Q16643 649 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 ISLR2Q6UXK2 745 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 NOP9Q86U38 636 aaKnown RBP16.95■□□□□ 0.3
CNOT3-204ENST00000447684 PCIF1Q9H4Z3 704 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 EURLQ9NYK6 297 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 ZNF652Q9Y2D9 606 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 COMMD3-BMI1R4GMX3 469 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 CCDC160A6NGH7 325 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 B2RBV5 119 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 USP17L10C9JJH3 530 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 ANPEPP15144 967 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 GCLMP48507 274 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 PPP4CP60510 307 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 LSAMPQ13449 338 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 ZFYVE27Q5T4F4 411 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 SLC30A10Q6XR72 485 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 RGS9BPQ6ZS82 235 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 KCTD1Q719H9 257 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 SLC47A2Q86VL8 602 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 PSPC1Q8WXF1 523 aaKnown RBP16.95■□□□□ 0.3
CNOT3-204ENST00000447684 ABTB1Q969K4 478 aaPredicted RBP16.95■□□□□ 0.3
CNOT3-204ENST00000447684 MPP4Q96JB8 637 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 TMEM120AQ9BXJ8 343 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 RABGAP1Q9Y3P9 1069 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 EMSYQ7Z589 1322 aa16.95■□□□□ 0.3
CNOT3-204ENST00000447684 SPATA31C1P0DKV0 1188 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 MAPK4P31152 587 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 NOVP48745 357 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 DLG4P78352 724 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 MTM1Q13496 603 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 CCDC89Q8N998 374 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 EBF3Q9H4W6 596 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 CYLDQ9NQC7 956 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 KCNQ5Q9NR82 932 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 TMCO1Q9UM00 188 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 DOT1LQ8TEK3 1739 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
CNOT3-204ENST00000447684 ENO1P06733 434 aaKnown RBP16.94■□□□□ 0.3
CNOT3-204ENST00000447684 RALAP11233 206 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 LMNB2Q03252 620 aa16.94■□□□□ 0.3
CNOT3-204ENST00000447684 RBM12BQ8IXT5 1001 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms