RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 LIMK1P53667 647 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 NTHL1P78549 312 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 RAD51AP2Q09MP3 1159 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 DMP1Q13316 513 aaPredicted RBP13.64□□□□□ -0.23
SSR4-205ENST00000447375 DHX8Q14562 1220 aaKnown RBP13.64□□□□□ -0.23
SSR4-205ENST00000447375 LILRA6Q6PI73 481 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.64□□□□□ -0.23
SSR4-205ENST00000447375 GLYCTKQ8IVS8 523 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 RNF168Q8IYW5 571 aaPredicted RBP13.64□□□□□ -0.23
SSR4-205ENST00000447375 KDF1Q8NAX2 398 aaPredicted RBP13.64□□□□□ -0.23
SSR4-205ENST00000447375 CPB2Q96IY4 423 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 KIFC3Q9BVG8 833 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 PANK2Q9BZ23 570 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 TMEM134Q9H6X4 195 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 SPEGQ15772 3267 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
SSR4-205ENST00000447375 CCDC169A6NNP5 214 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 K7ERI5 159 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 HRO43593 1189 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 EFEMP2O95967 443 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 NCLP19338 710 aaKnown RBP13.63□□□□□ -0.23
SSR4-205ENST00000447375 OR1G1P47890 313 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 ME1P48163 572 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 ZNF131P52739 623 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 KRT85P78386 507 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 NUCB2P80303 420 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 PRPF4BQ13523 1007 aaKnown RBP13.63□□□□□ -0.23
SSR4-205ENST00000447375 AASDHQ4L235 1098 aaPredicted RBP13.63□□□□□ -0.23
SSR4-205ENST00000447375 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 REEP2Q9BRK0 252 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
SSR4-205ENST00000447375 CHRDQ9H2X0 955 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 RSAD1Q9HA92 442 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 KMT5AQ9NQR1 393 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 HEBP1Q9NRV9 189 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.63□□□□□ -0.238e-7■□□□□ 11.2
SSR4-205ENST00000447375 CHST7Q9NS84 486 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 LARSQ9P2J5 1176 aaKnown RBP13.63□□□□□ -0.23
SSR4-205ENST00000447375 PHLPP2Q6ZVD8 1323 aa13.63□□□□□ -0.23
SSR4-205ENST00000447375 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 PRKCBP05771 671 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 STAT6P42226 847 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 CCR3P51677 355 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 SMTNP53814 917 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 E2F4Q16254 413 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 LRSAM1Q6UWE0 723 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 SV2BQ7L1I2 683 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
SSR4-205ENST00000447375 TMEM161BQ8NDZ6 487 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 LEO1Q8WVC0 666 aaPredicted RBP13.62□□□□□ -0.23
SSR4-205ENST00000447375 KCNN1Q92952 543 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 B3GALT6Q96L58 329 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 FNIP2Q9P278 1114 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
SSR4-205ENST00000447375 IPPQ9Y573 584 aa13.62□□□□□ -0.23
SSR4-205ENST00000447375 MYMKA6NI61 221 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 SHISA7A6NL88 538 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 SLC16A4O15374 487 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 KCNK5O95279 499 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 EDN1P05305 212 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 RPL17P18621 184 aaKnown RBP13.61□□□□□ -0.23
SSR4-205ENST00000447375 SCP2P22307 547 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 CNR2P34972 360 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 CACNB1Q02641 598 aaPredicted RBP13.61□□□□□ -0.23
SSR4-205ENST00000447375 SRSF5Q13243 272 aaKnown RBP13.61□□□□□ -0.23
SSR4-205ENST00000447375 NT5DC1Q5TFE4 455 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 RESP18Q5W5W9 173 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 TAS1R3Q7RTX0 852 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 ZNF687Q8N1G0 1237 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 PDILTQ8N807 584 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 SPATA32Q96LK8 384 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 IER2Q9BTL4 223 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 SCAND2PQ9GZW5 306 aaPredicted RBP13.61□□□□□ -0.23
SSR4-205ENST00000447375 CUEDC2Q9H467 287 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 PDZD7Q9H5P4 517 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 PARVGQ9HBI0 331 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 POLIQ9UNA4 740 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 USP20Q9Y2K6 914 aa13.61□□□□□ -0.23
SSR4-205ENST00000447375 H0YCG3 227 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 MAN2B1O00754 1011 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 N4BP3O15049 544 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 CCL16O15467 120 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 ECI2O75521 394 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 FAM13AO94988 1023 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 KRT18P05783 430 aaKnown RBP13.6□□□□□ -0.23
SSR4-205ENST00000447375 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSR4-205ENST00000447375 MAPTP10636 758 aaKnown RBP13.6□□□□□ -0.23
SSR4-205ENST00000447375 ITGA4P13612 1032 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 LIG1P18858 919 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 CMA1P23946 247 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 CXCL12P48061 93 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms