RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 MSX2P35548 267 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 HTR3AP46098 478 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 TM4SF4P48230 202 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 FOXL1Q12952 345 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 ELAVL1Q15717 326 aaKnown RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 TBC1D10BQ4KMP7 808 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 UBXN11Q5T124 520 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 ATXN7L2Q5T6C5 722 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 EFCAB12Q6NXP0 572 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 DRICH1Q6PGQ1 229 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZNF365Q70YC5 407 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 UBE3BQ7Z3V4 1068 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 CIR1Q86X95 450 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 XYLT1Q86Y38 959 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 FUKQ8N0W3 1084 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 D2HGDHQ8N465 521 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 AOPEPQ8N6M6 819 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 CELF5Q8N6W0 485 aaKnown RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 MDGA1Q8NFP4 955 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 PARD3BQ8TEW8 1205 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 KBTBD7Q8WVZ9 684 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 TNPO1Q92973 898 aaKnown RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 GJA10Q969M2 543 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 TNIP3Q96KP6 325 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 PSMD1Q99460 953 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZCCHC4Q9H5U6 513 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 KIAA1586Q9HCI6 787 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 RTEL1Q9NZ71 1219 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZFR2Q9UPR6 939 aaKnown RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 SH3BP1Q9Y3L3 701 aa5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 ARID4BQ4LE39 1312 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P16-201ENST00000447155 SMARCA4P51532 1647 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 RHPN2P1A8MT19 583 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 TPD52L2O43399 206 aaKnown RBP5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 ANXA1P04083 346 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 EN2P19622 333 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 MGAT1P26572 445 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 SLC6A4P31645 630 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 ARFIP2P53365 341 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 SOX8P57073 446 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 MORC3Q14149 939 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 KIF22Q14807 665 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 UBXN2BQ14CS0 331 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 VPS72Q15906 364 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 CNGA2Q16280 664 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 LONRF1Q17RB8 773 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 GLB1LQ6UWU2 654 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 POLNQ7Z5Q5 900 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 PDSS2Q86YH6 399 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 ELOA2Q8IYF1 753 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 ANKRD35Q8N283 1001 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 OR52N2Q8NGI0 321 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 PHKBQ93100 1093 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 TEPSINQ96N21 525 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 TBCBQ99426 244 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 MYD88Q99836 296 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 TRIM54Q9BYV2 358 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 BRD9Q9H8M2 597 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 PARD6AQ9NPB6 346 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 OGDHLQ9ULD0 1010 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 USP19O94966 1318 aa5.38□□□□□ -1.55
HMGB1P16-201ENST00000447155 PRSS29PA6NIE9 313 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 GPR42O15529 346 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 FOXS1O43638 330 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 GJB1P08034 283 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 RARBP10826 455 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 HDCP19113 662 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 PIK3CBP42338 1070 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 ALDH5A1P51649 535 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 EXOSC9Q06265 439 aaKnown RBP5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 DCAF17Q5H9S7 520 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 MORC1Q86VD1 984 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 FAM186BQ8IYM0 893 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 MIEF2Q96C03 454 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 PGBD4Q96DM1 585 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 CPEB1Q9BZB8 566 aaKnown RBP5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 GSTO2Q9H4Y5 243 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZNF287Q9HBT7 754 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 SPON1Q9HCB6 807 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 NLRC4Q9NPP4 1024 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 FBXO34Q9NWN3 711 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 MED16Q9Y2X0 877 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 NCAPD3P42695 1498 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 MAP3K1Q13233 1512 aa5.37□□□□□ -1.55
HMGB1P16-201ENST00000447155 TBX3O15119 743 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 LDHAP00338 332 aaKnown RBP5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 GNAI2P04899 355 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 BRAFP15056 766 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZKSCAN1P17029 563 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 KCNJ5P48544 419 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 CASP5P51878 434 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 NOMO3P69849 1222 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 FMO1Q01740 532 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 HHEXQ03014 270 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 HABP2Q14520 560 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 CSRP2Q16527 193 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms