RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 KIF4AO95239 1232 aa11.07□□□□□ -0.64
LIN54-203ENST00000446851 HLA-DRAP01903 254 aa11.07□□□□□ -0.64
LIN54-203ENST00000446851 P4HA1P13674 534 aa11.07□□□□□ -0.64
LIN54-203ENST00000446851 FOSL2P15408 326 aa11.07□□□□□ -0.64
LIN54-203ENST00000446851 SOX4Q06945 474 aaPredicted RBP11.07□□□□□ -0.64
LIN54-203ENST00000446851 MYLIPQ8WY64 445 aa11.07□□□□□ -0.64
LIN54-203ENST00000446851 C11orf84Q9BUA3 381 aaPredicted RBP11.07□□□□□ -0.64
LIN54-203ENST00000446851 FAM49BQ9NUQ9 324 aa11.07□□□□□ -0.64
LIN54-203ENST00000446851 INTS13Q9NVM9 706 aa11.07□□□□□ -0.64
LIN54-203ENST00000446851 CPSF3Q9UKF6 684 aaKnown RBP11.07□□□□□ -0.64
LIN54-203ENST00000446851 RBBP6Q7Z6E9 1792 aaKnown RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 FRMD3A2A2Y4 597 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 AFPP02771 609 aaKnown RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 KYAT1Q16773 422 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 EXOC3L4Q17RC7 722 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 KRT39Q6A163 491 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 APPL2Q8NEU8 664 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 MRPL17Q9NRX2 175 aaKnown RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 GALTP07902 379 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 IGFBP6P24592 240 aaPredicted RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 NDUFV1P49821 464 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 APBA1Q02410 837 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 MGAT5BQ3V5L5 792 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 CENPPQ6IPU0 288 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 EFCAB13Q8IY85 973 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 PARD3BQ8TEW8 1205 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 ZNF560Q96MR9 790 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 LSM14BQ9BX40 385 aaKnown RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 ADAM28Q9UKQ2 775 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 GRM6O15303 877 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 OR1D2P34982 312 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 YWHAHQ04917 246 aaPredicted RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 FAM187BQ17R55 369 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 TDRD12Q587J7 1177 aaKnown RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 WSCD1Q658N2 575 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 SNX27Q96L92 541 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 SENP8Q96LD8 212 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 HEXIM2Q96MH2 286 aaKnown RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 CLDND1Q9NY35 253 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 PCDHB4Q9Y5E5 795 aa11.06□□□□□ -0.64
LIN54-203ENST00000446851 MORC2Q9Y6X9 1032 aaPredicted RBP11.06□□□□□ -0.64
LIN54-203ENST00000446851 PTGESO14684 152 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 CST3P01034 146 aaPredicted RBP11.05□□□□□ -0.64
LIN54-203ENST00000446851 ERCC5P28715 1186 aaPredicted RBP11.05□□□□□ -0.64
LIN54-203ENST00000446851 WNT7BP56706 349 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 FUT10Q6P4F1 479 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 THEM5Q8N1Q8 247 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 FBXL13Q8NEE6 735 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 NT5C1BQ96P26 610 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 ASB7Q9H672 318 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 SYNCQ9H7C4 482 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 CDH23Q9H251 3354 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 LRRIQ3A6PVS8 624 aaPredicted RBP11.05□□□□□ -0.64
LIN54-203ENST00000446851 ZNF623O75123 536 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 GNA14O95837 355 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 ADORA2BP29275 332 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 BMPR1AP36894 532 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 NRIP1P48552 1158 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 DSC3Q14574 896 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 TAF3Q5VWG9 929 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 OVOS1Q6IE37 1185 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 TTI2Q6NXR4 508 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 GPR62Q9BZJ7 368 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.645e-6■■■■■ 102.5
LIN54-203ENST00000446851 KPNA7A9QM74 516 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 PPM1AP35813 382 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 PPP3CAQ08209 521 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 GRIN2CQ14957 1233 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 EDRF1Q3B7T1 1238 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 LIN9Q5TKA1 542 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 GBP6Q6ZN66 633 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 PPFIBP1Q86W92 1011 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 NEK11Q8NG66 645 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 CASD1Q96PB1 797 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 NDST4Q9H3R1 872 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 CDY1Q9Y6F8 540 aa11.05□□□□□ -0.64
LIN54-203ENST00000446851 TTC26A0AVF1 554 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 PIK3R2O00459 728 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 STX10O60499 249 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 ARHGEF15O94989 841 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 NOP14P78316 857 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 GJB7Q6PEY0 223 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TMEM270Q6UE05 265 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 GPR152Q8TDT2 470 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 DUSP9Q99956 384 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.64
LIN54-203ENST00000446851 SLC27A5Q9Y2P5 690 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 H3BQ06 376 aaPredicted RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 PPP1R37O75864 691 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TKTP29401 623 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 POLR2FP61218 127 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 TSPY1Q01534 308 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 KRT31Q15323 416 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 PTPROQ16827 1216 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 HABP4Q5JVS0 413 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 C1orf127Q8N9H9 656 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms