RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 FAM49AQ9H0Q0 323 aaPredicted RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 DDX47Q9H0S4 455 aaKnown RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 GTF3C4Q9UKN8 822 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 CCDC66A2RUB6 948 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 VGLL3A8MV65 326 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZEB2O60315 1214 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 ASS1P00966 412 aaKnown RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 HOXC6P09630 235 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 STAG3L1P0CL83 205 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 CYP2C19P33261 490 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 HADHBP55084 474 aaKnown RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 GRM1Q13255 1194 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZNF699Q32M78 642 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 MARCH8Q5T0T0 291 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 C11orf63Q6NUN7 778 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 LLGL2Q6P1M3 1020 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 SND1Q7KZF4 910 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZNF677Q86XU0 584 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 EFCAB13Q8IY85 973 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 MCOLN2Q8IZK6 566 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 RASGEF1CQ8N431 466 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 TMEM59LQ9UK28 342 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 LACTBL1A8MY62 500 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 SART1O43290 800 aaKnown RBP10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 ERLIN2O94905 339 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 ITGBL1O95965 494 aaPredicted RBP10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 ARF4P18085 180 aaPredicted RBP10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 CYP2B6P20813 491 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 RRM1P23921 792 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 MARCKSL1P49006 195 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 CARSP49589 748 aaKnown RBP10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 FAM193AP78312 1265 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 TRADDQ15628 312 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 KIZQ2M2Z5 673 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 IPO4Q8TEX9 1081 aaKnown RBP10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 CALR3Q96L12 384 aaKnown RBP10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 NFKBIZQ9BYH8 718 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 CISHQ9NSE2 258 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 FLRT1Q9NZU1 646 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 UVRAGQ9P2Y5 699 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 AMACRQ9UHK6 382 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 ANAPC7Q9UJX3 599 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 NFU1Q9UMS0 254 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 NFICP08651 508 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 MAP2K5Q13163 448 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 TCEAL1Q15170 157 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 LLGL1Q15334 1064 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 CCL14Q16627 93 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 RASAL3Q86YV0 1011 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 KIAA0319LQ8IZA0 1049 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 LINC01465Q8N7H1 131 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZNF606Q8WXB4 792 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 C11orf70Q9BRQ4 267 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 TRIM7Q9C029 511 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 PDZD7Q9H5P4 517 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 POLIQ9UNA4 740 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 NR2E1Q9Y466 385 aa10.17□□□□□ -0.78
COL6A4P1-201ENST00000446690 MIF4GDA9UHW6 222 aaKnown RBP10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 H3BQF6 201 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 B4GALT4O60513 344 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 IL18RAPO95256 599 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 POU5F1BQ06416 359 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 AMHR2Q16671 573 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 WDR72Q3MJ13 1102 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 MORN1Q5T089 497 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 JADE1Q6IE81 842 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 AENQ8WTP8 325 aaKnown RBP10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 RPS6KC1Q96S38 1066 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 NIF3L1Q9GZT8 377 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 WNT8AQ9H1J5 351 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 CARD9Q9H257 536 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 ACBD3Q9H3P7 528 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 GDF3Q9NR23 364 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 ADAM22Q9P0K1 906 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 COL1A2P08123 1366 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 PLXNB2O15031 1838 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 MANSC4A6NHS7 340 aaPredicted RBP10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 CCDC188H7C350 402 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 MTA2O94776 668 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 CYP1A1P04798 512 aaPredicted RBP10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 ITGB3P05106 788 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 MCF2P10911 925 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 BRD2P25440 801 aaKnown RBP10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 RAP1GAPP47736 663 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 GUCY2FP51841 1108 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 EPHB4P54760 987 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 GYS2P54840 703 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 FAM187BQ17R55 369 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 HSP90B2PQ58FF3 399 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 LIN9Q5TKA1 542 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 MMS22LQ6ZRQ5 1243 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 TLK2Q86UE8 772 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 CASKIN2Q8WXE0 1202 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 RUBCNQ92622 972 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 NAP1L3Q99457 506 aaPredicted RBP10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 CELF4Q9BZC1 486 aaKnown RBP10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 HPCAL4Q9UM19 191 aa10.16□□□□□ -0.78
COL6A4P1-201ENST00000446690 GOLGA6L10A0A0M3HER8 536 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 MYO1FO00160 1098 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms