RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PI4K2AQ9BTU6 479 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 INTS2Q9H0H0 1204 aaKnown RBP18.75■□□□□ 0.59
SGCE-206ENST00000445866 RC3H2Q9HBD1 1191 aaKnown RBP18.75■□□□□ 0.59
SGCE-206ENST00000445866 GTPBP10A4D1E9 387 aaKnown RBP18.74■□□□□ 0.59
SGCE-206ENST00000445866 PPEF2O14830 753 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 B3GAT3O94766 335 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 GALTP07902 379 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 SLC9A1P19634 815 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 ATICP31939 592 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 LRMPQ12912 555 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 MYO1EQ12965 1108 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 SYCP1Q15431 976 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 PTPN21Q16825 1174 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 EPC2Q52LR7 807 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 CHRDL2Q6WN34 429 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 ELMO3Q96BJ8 720 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 COLEC11Q9BWP8 271 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 IMPG2Q9BZV3 1241 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 CWH43Q9H720 699 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 GCNT4Q9P109 453 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 PRG3Q9Y2Y8 225 aaPredicted RBP18.74■□□□□ 0.59
SGCE-206ENST00000445866 MRPL42Q9Y6G3 142 aaKnown RBP18.74■□□□□ 0.59
SGCE-206ENST00000445866 SIP14410 1827 aa18.74■□□□□ 0.59
SGCE-206ENST00000445866 SCN5AQ14524 2016 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.73■□□□□ 0.59
SGCE-206ENST00000445866 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.73■□□□□ 0.59
SGCE-206ENST00000445866 NRP1O14786 923 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 IGFBP6P24592 240 aaPredicted RBP18.73■□□□□ 0.59
SGCE-206ENST00000445866 PON1P27169 355 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 SLC11A1P49279 550 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 MRE11P49959 708 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 BCAR1P56945 870 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 KCNMA1Q12791 1236 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 LRRC52Q8N7C0 313 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 LMO3Q8TAP4 145 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 TMEM175Q9BSA9 504 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 NT5C1B-RDH14C9J2C7 533 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 TADA2AO75478 443 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 PNPLA4P41247 253 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 LILRA4P59901 499 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 ZNF699Q32M78 642 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 TDHQ8IZJ6 230 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 ERGIC2Q96RQ1 377 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 XYLT2Q9H1B5 865 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 NUB1Q9Y5A7 615 aa18.73■□□□□ 0.59
SGCE-206ENST00000445866 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 MYOGP15173 224 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 PBX3P40426 434 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 TAF6P49848 677 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 KLK7P49862 253 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 ZNF75DP51815 510 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 WDR72Q3MJ13 1102 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 SPOPLQ6IQ16 392 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 TAF4BQ92750 862 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 TATDN2Q93075 761 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 ZNF558Q96NG5 402 aa18.72■□□□□ 0.59
SGCE-206ENST00000445866 LSM14BQ9BX40 385 aaKnown RBP18.72■□□□□ 0.59
SGCE-206ENST00000445866 NXF1Q9UBU9 619 aaKnown RBP18.72■□□□□ 0.59
SGCE-206ENST00000445866 A0A1W2PQC6 194 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 LCHNA4D1U4 455 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 F8W810 466 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 ADCY5O95622 1261 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 ASS1P00966 412 aaKnown RBP18.71■□□□□ 0.59
SGCE-206ENST00000445866 APBA1Q02410 837 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 KCNT2Q6UVM3 1135 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 HASPINQ8TF76 798 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 ZNF560Q96MR9 790 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 AAASQ9NRG9 546 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 FAM207AQ9NSI2 230 aaPredicted RBP18.71■□□□□ 0.59
SGCE-206ENST00000445866 SIK3Q9Y2K2 1263 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 TANC1Q9C0D5 1861 aa18.71■□□□□ 0.59
SGCE-206ENST00000445866 KPNA7A9QM74 516 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 SPTLC1O15269 473 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 LAG3P18627 525 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 SV2CQ496J9 727 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 ZNF667Q5HYK9 610 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 TRIM65Q6PJ69 517 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 C3orf58Q8NDZ4 430 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 SP7Q8TDD2 431 aaPredicted RBP18.7■□□□□ 0.58
SGCE-206ENST00000445866 NT5C1BQ96P26 610 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 MMS19Q96T76 1030 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 APOBEC3GQ9HC16 384 aaKnown RBP18.7■□□□□ 0.58
SGCE-206ENST00000445866 UBE2TQ9NPD8 197 aaPredicted RBP18.7■□□□□ 0.58
SGCE-206ENST00000445866 PCDHB12Q9Y5F1 795 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 PCDHA11Q9Y5I1 949 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 SNX9Q9Y5X1 595 aa18.7■□□□□ 0.58
SGCE-206ENST00000445866 KIF4AO95239 1232 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 P4HA1P13674 534 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 NOP14P78316 857 aaKnown RBP18.69■□□□□ 0.58
SGCE-206ENST00000445866 KLHDC7AQ5VTJ3 777 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 PHLDB3Q6NSJ2 640 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 CD300LGQ6UXG3 332 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 DSTYKQ6XUX3 929 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 RRAGAQ7L523 313 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 COLGALT1Q8NBJ5 622 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 NEK11Q8NG66 645 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 VRTNQ9H8Y1 702 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 CYB561D2O14569 222 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 TRAPPC3O43617 180 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms