RNA–Protein interactions for RNA: ENST00000444396.5

NR1H3-212, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-212ENST00000444396 LRRIQ3A6PVS8 624 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-212ENST00000444396 SYN3O14994 580 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 DLATP10515 647 aaKnown RBP20.29■□□□□ 0.84
NR1H3-212ENST00000444396 TNNI1P19237 187 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 GTF2H1P32780 548 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 VAMP7P51809 220 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 USP41Q3LFD5 358 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-212ENST00000444396 VPS52Q8N1B4 723 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 OR5B17Q8NGF7 314 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 CCDC127Q96BQ5 260 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 SUSD3Q96L08 255 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 ZNF560Q96MR9 790 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 MED15Q96RN5 788 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 GPR62Q9BZJ7 368 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 MTMR12Q9C0I1 747 aa20.29■□□□□ 0.84
NR1H3-212ENST00000444396 SZT2Q5T011 3432 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 ARHGEF37A1IGU5 675 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 FSD2A1L4K1 749 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 F8W810 466 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 M0QZQ0 153 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 STAU1O95793 577 aaKnown RBP20.28■□□□□ 0.84
NR1H3-212ENST00000444396 FGFR3P22607 806 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 LILRA4P59901 499 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 RBP5P82980 135 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 DSG1Q02413 1049 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 SMC1AQ14683 1233 aaKnown RBP20.28■□□□□ 0.84
NR1H3-212ENST00000444396 PDXDC1Q6P996 788 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 C15orf39Q6ZRI6 1047 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 TRAPPC11Q7Z392 1133 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 MYLIPQ8WY64 445 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 PPP2R3CQ969Q6 453 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 TCF25Q9BQ70 676 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 NSUN3Q9H649 340 aaKnown RBP20.28■□□□□ 0.84
NR1H3-212ENST00000444396 ARMCX3Q9UH62 379 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-212ENST00000444396 NUB1Q9Y5A7 615 aa20.28■□□□□ 0.84
NR1H3-212ENST00000444396 STX10O60499 249 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 LILRB3O75022 631 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 C1RP00736 705 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 C4BPAP04003 597 aaKnown RBP20.27■□□□□ 0.84
NR1H3-212ENST00000444396 ITGB3P05106 788 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 FOSL2P15408 326 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 GLUD2P49448 558 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 TAF6P49848 677 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 GUCY2FP51841 1108 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 STX17P56962 302 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 ERVFC1P60507 584 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 CREMQ03060 361 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 ZACNQ401N2 412 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 SV2CQ496J9 727 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 C1orf220Q5T0J3 134 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 KIAA0319Q5VV43 1072 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 MRPL43Q8N983 215 aaKnown RBP20.27■□□□□ 0.84
NR1H3-212ENST00000444396 ZNF516Q92618 1163 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 RABGGTAQ92696 567 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.27■□□□□ 0.84
NR1H3-212ENST00000444396 SIX4Q9UIU6 781 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 CDH23Q9H251 3354 aa20.27■□□□□ 0.84
NR1H3-212ENST00000444396 URODP06132 367 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 TYRO3Q06418 890 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 PTPN14Q15678 1187 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 TMC7Q7Z402 723 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 ENOX1Q8TC92 643 aaKnown RBP20.26■□□□□ 0.83
NR1H3-212ENST00000444396 PIK3R5Q8WYR1 880 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 POP1Q99575 1024 aaKnown RBP20.26■□□□□ 0.83
NR1H3-212ENST00000444396 CDCA3Q99618 268 aaPredicted RBP20.26■□□□□ 0.83
NR1H3-212ENST00000444396 TTPALQ9BTX7 342 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 SRRTQ9BXP5 876 aaKnown RBP20.26■□□□□ 0.83
NR1H3-212ENST00000444396 THAP9Q9H5L6 903 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 VRTNQ9H8Y1 702 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 RXFP1Q9HBX9 757 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 ENTPD7Q9NQZ7 604 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 PCDHB8Q9UN66 801 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 STXBP5LQ9Y2K9 1186 aa20.26■□□□□ 0.83
NR1H3-212ENST00000444396 ATG2AQ2TAZ0 1938 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 PPEF2O14830 753 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 PMM2O15305 246 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 CCDC192P0DO97 292 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 PRKCSHP14314 528 aaPredicted RBP20.25■□□□□ 0.83
NR1H3-212ENST00000444396 TYMPP19971 482 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 POLR2BP30876 1174 aaKnown RBP20.25■□□□□ 0.83
NR1H3-212ENST00000444396 ATICP31939 592 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 IRS1P35568 1242 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 BRCC3P46736 316 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 DLG4P78352 724 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 FAM171A1Q5VUB5 890 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 LMBRD2Q68DH5 695 aaPredicted RBP20.25■□□□□ 0.83
NR1H3-212ENST00000444396 APPL2Q8NEU8 664 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 SPATA18Q8TC71 538 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 HASPINQ8TF76 798 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 EEF2KMTQ96G04 330 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 FUCA2Q9BTY2 467 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 OXCT2Q9BYC2 517 aaPredicted RBP20.25■□□□□ 0.83
NR1H3-212ENST00000444396 TMEM8AQ9HCN3 771 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 MRPL17Q9NRX2 175 aaKnown RBP20.25■□□□□ 0.83
NR1H3-212ENST00000444396 GDAP2Q9NXN4 497 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 FNIP2Q9P278 1114 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 AGAP1Q9UPQ3 857 aa20.25■□□□□ 0.83
NR1H3-212ENST00000444396 R3HCC1Q9Y3T6 440 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms