RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CLTAP09496 248 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 CXCL8P10145 99 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 FGFR3P22607 806 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 IGFBP6P24592 240 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 TKTP29401 623 aaKnown RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 RPL9P32969 192 aaKnown RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 ABCD1P33897 745 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 PPP2R3AQ06190 1150 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 XKR4Q5GH76 650 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 AXDND1Q5T1B0 1012 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 USP49Q70CQ1 688 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 GET4Q7L5D6 327 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 DYMQ7RTS9 669 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 SLC7A14Q8TBB6 771 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 ZNF707Q96C28 371 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 FAM212AQ96EL1 285 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 ASIC4Q96FT7 647 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 CLIC6Q96NY7 704 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 FBXW11Q9UKB1 542 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 SRPRBQ9Y5M8 271 aaKnown RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 VPS13AQ96RL7 3174 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 ADAM12O43184 909 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 XYLBO75191 536 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 ARPP19P56211 112 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 SPAG1Q07617 926 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 TDGQ13569 410 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 PTPAQ15257 358 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 SLC10A6Q3KNW5 377 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 LRRC15Q8TF66 581 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 KIF12Q96FN5 646 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 MSTO1Q9BUK6 570 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 RHOBTB2Q9BYZ6 727 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 KCNH6Q9H252 994 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 SMOC2Q9H3U7 446 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 MTRRQ9UBK8 725 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 STK17AQ9UEE5 414 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 FBXO2Q9UK22 296 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-203ENST00000443016 FBXL21Q9UKT6 434 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 SSUH2Q9Y2M2 353 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 MYH11P35749 1972 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 CUTAO60888 179 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 MBD3O95983 291 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 HNRNPA1P09651 372 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP6NL-203ENST00000443016 NMT1P30419 496 aaKnown RBP9.52□□□□□ -0.89
USP6NL-203ENST00000443016 ELF1P32519 619 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 ZNF131P52739 623 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 UBE2HP62256 183 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 RAB33AQ14088 237 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 KYAT1Q16773 422 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 SV2BQ7L1I2 683 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 GRASPQ7Z6J2 395 aaPredicted RBP9.52□□□□□ -0.89
USP6NL-203ENST00000443016 CHAMP1Q96JM3 812 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 PANK2Q9BZ23 570 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 RPF1Q9H9Y2 349 aaKnown RBP9.52□□□□□ -0.89
USP6NL-203ENST00000443016 PLEKHA5Q9HAU0 1116 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 IGSF9Q9P2J2 1179 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 USP34Q70CQ2 3546 aa9.52□□□□□ -0.89
USP6NL-203ENST00000443016 ZFHX2Q9C0A1 2572 aaPredicted RBP9.52□□□□□ -0.89
USP6NL-203ENST00000443016 PRRG1O14668 218 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 CCL16O15467 120 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 XPOTO43592 962 aaKnown RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 N4BP1O75113 896 aaKnown RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 PRPF40AO75400 957 aaKnown RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 PDGFBP01127 241 aaPredicted RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 TNFSF9P41273 254 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 NFKBIBQ15653 356 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 CCDC73Q6ZRK6 1079 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 TUBGCP4Q9UGJ1 667 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 BACE2Q9Y5Z0 518 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 TRIP11Q15643 1979 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 H7C4K7 107 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 SYN3O14994 580 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 OGTO15294 1046 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 IDEP14735 1019 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 FSHRP23945 695 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 STAT6P42226 847 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 UVSSAQ2YD98 709 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 CTXN3Q4LDR2 81 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 ZC2HC1CQ53FD0 456 aaPredicted RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 IER5LQ5T953 404 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 ADALQ6DHV7 355 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 APPL2Q8NEU8 664 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 DDX12PQ92771 950 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 MYADMQ96S97 322 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 PRRX2Q99811 253 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 HAPLN2Q9GZV7 340 aa9.51□□□□□ -0.89
USP6NL-203ENST00000443016 MRPL44Q9H9J2 332 aaKnown RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 UBQLN1Q9UMX0 589 aaKnown RBP9.51□□□□□ -0.89
USP6NL-203ENST00000443016 TTC26A0AVF1 554 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 LRG1P02750 347 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 LAMP2P13473 410 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 AVPR2P30518 371 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 GTF2BQ00403 316 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 ROR1Q01973 937 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 ZNF280DQ6N043 979 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 CD300LGQ6UXG3 332 aa9.5□□□□□ -0.89
USP6NL-203ENST00000443016 RSPO2Q6UXX9 243 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms