RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 KNOP1Q1ED39 458 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SLC9C1Q4G0N8 1177 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RAPH1Q70E73 1250 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NLRP10Q86W26 655 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TRMT44Q8IYL2 757 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 KRT78Q8N1N4 520 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ASCC1Q8N9N2 400 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 LILRB4Q8NHJ6 448 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ENKURQ8TC29 256 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RBM14Q96PK6 669 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 COPS4Q9BT78 406 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 EPB41L1Q9H4G0 881 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ZSWIM6Q9HCJ5 1215 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 KRT84Q9NSB2 600 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RCOR1Q9UKL0 485 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 F8W031 263 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 H0YJX3 145 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 PRMT3O60678 531 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ZNF254O75437 659 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MYO1DO94832 1006 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 DLATP10515 647 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 GJA1P17302 382 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ATF7P17544 494 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 POLR2BP30876 1174 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TTKP33981 857 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MRPS5P82675 430 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CRY1Q16526 586 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CCDC142Q17RM4 750 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TYSND1Q2T9J0 566 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TTMPQ5BVD1 217 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TTC39BQ5VTQ0 682 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CASC4Q6P4E1 433 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TTC7BQ86TV6 843 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MIB1Q86YT6 1006 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MMAAQ8IVH4 418 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 LRRC34Q8IZ02 419 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 SUPT20HQ8NEM7 779 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 DDX54Q8TDD1 881 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ERLEC1Q96DZ1 483 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 KIFC1Q9BW19 673 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ELOVL6Q9H5J4 265 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 C8orf33Q9H7E9 229 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 SH3GLB2Q9NR46 395 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 IL20Q9NYY1 176 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 USTQ9Y2C2 406 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 RPH3AQ9Y2J0 694 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ADGRA3Q8IWK6 1321 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 NUTM2FA1L443 756 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CARNS1A5YM72 827 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 FAM172BPA6NC97 362 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 METTL21EPA6NDL7 271 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ATP6V1G2-DDX39BF2Z307 99 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 SLC27A2O14975 620 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 FKBP6O75344 327 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 NFICP08651 508 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 STAT1P42224 750 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 RTP1P59025 263 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ECT2LQ008S8 904 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MYLK3Q32MK0 819 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MDH1BQ5I0G3 518 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CRTC1Q6UUV9 634 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 POLNQ7Z5Q5 900 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 C10orf53Q8N6V4 93 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 PLEKHO2Q8TD55 490 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 UTP15Q8TED0 518 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CHMP7Q8WUX9 453 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MND1Q9BWT6 205 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CDADC1Q9BWV3 514 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 HAO1Q9UJM8 370 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ACAD8Q9UKU7 415 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 RUVBL2Q9Y230 463 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 COL4A3BPQ9Y5P4 624 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 AP1M2Q9Y6Q5 423 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 BHMG1C9JSJ3 638 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 RNF103O00237 685 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 IDH1O75874 414 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 NADKO95544 446 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 PLEKP08567 350 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 PTPN9P43378 593 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 PHKA1P46020 1223 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 PRIM2P49643 509 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MAPK12P53778 367 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 POLGP54098 1239 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 INHBEP58166 350 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 PRAMEP78395 509 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 RAD51Q06609 339 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 LRRC74AQ0VAA2 488 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ZNF268Q14587 947 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 CNGA2Q16280 664 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 NFE2Q16621 373 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TTC27Q6P3X3 843 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 ZNF598Q86UK7 904 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TRIM22Q8IYM9 498 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 SRBD1Q8N5C6 995 aaKnown RBP5.86□□□□□ -1.47
PTPRC-209ENST00000442510 NEDD1Q8NHV4 660 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 SGCDQ92629 289 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 DPF3Q92784 378 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 MAGED4Q96JG8 741 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 COG8Q96MW5 612 aa5.86□□□□□ -1.47
PTPRC-209ENST00000442510 TUBGCP2Q9BSJ2 902 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms