RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 EIF2S1P05198 315 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 ESRRAP11474 423 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 DRD4P21917 467 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CXCR5P32302 372 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ACADVLP49748 655 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CDK7P50613 346 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 STX17P56962 302 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TIMM10P62072 90 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ADAM17P78536 824 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TNFAIP1Q13829 316 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 BYSLQ13895 437 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 RASGRF1Q13972 1273 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 LPIN1Q14693 890 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 GSTA3Q16772 222 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ARL13BQ3SXY8 428 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TMEM63BQ5T3F8 832 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 DEPDC1Q5TB30 811 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NEPROQ6NW34 567 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RNF19BQ6ZMZ0 732 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RASGRP2Q7LDG7 609 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TRAPPC11Q7Z392 1133 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RBM23Q86U06 439 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 SIRT2Q8IXJ6 389 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 KLHL7Q8IXQ5 586 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ESX1Q8N693 406 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ANKLE1Q8NAG6 615 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CFAP61Q8NHU2 1237 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RFWD2Q8NHY2 731 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 FNDC8Q8TC99 324 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ANKRD49Q8WVL7 239 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CAPSLQ8WWF8 208 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 COX4I2Q96KJ9 171 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ACAP3Q96P50 834 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TSG101Q99816 390 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 STMN4Q9H169 189 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 CAAP1Q9H8G2 361 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 C10orf88Q9H8K7 445 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 MARCH7Q9H992 704 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 VAT1LQ9HCJ6 419 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 WDR6Q9NNW5 1121 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 IL1RAPL2Q9NP60 686 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SERPINA10Q9UK55 444 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 KIAA1257Q9ULG3 409 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SLC12A4Q9UP95 1085 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TRAF3IP3Q9Y228 551 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 COQ6Q9Y2Z9 468 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NOX1Q9Y5S8 564 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CICQ96RK0 1608 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 A0A1W2PQ67 120 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CCDC162PA2VCL2 907 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 MANSC4A6NHS7 340 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 H0YC42 278 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CASQ2O14958 399 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 ADCY6O43306 1168 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 STRNO43815 780 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 JAK2O60674 1132 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CIB2O75838 187 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ATP5HO75947 161 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 WFS1O76024 890 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 IFIT1P09914 478 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 TPBGLP0DKB5 382 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 KRT10P13645 584 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CHN1P15882 459 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TCP1P17987 556 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 KCNA5P22460 613 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ATP5DP30049 168 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 IL13P35225 146 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PTGS2P35354 604 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ETV3P41162 512 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ADCYAP1R1P41586 468 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CARSP49589 748 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 TPD52P55327 224 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 FLIIQ13045 1269 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SNAPC2Q13487 334 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 E2F2Q14209 437 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TMEM266Q2M3C6 531 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SMU1Q2TAY7 513 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CFAP221Q4G0U5 840 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 VWA3BQ502W6 1294 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 FAM209AQ5JX71 171 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 C6orf118Q5T5N4 469 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NXNQ6DKJ4 435 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 KLHL35Q6PF15 583 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 LRRC74BQ6ZQY2 392 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ZNF662Q6ZS27 426 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CYP4V2Q6ZWL3 525 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 CLVS1Q8IUQ0 354 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 ANKMY2Q8IV38 441 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TSPYL6Q8N831 410 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ANKRD42Q8N9B4 389 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SPATA4Q8NEY3 305 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PIP4K2CQ8TBX8 421 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ASAP3Q8TDY4 903 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SNX29Q8TEQ0 813 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 BRI3BPQ8WY22 251 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PMM1Q92871 262 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 WNK4Q96J92 1243 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CCDC138Q96M89 665 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ZNF184Q99676 751 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 RIOK1Q9BRS2 568 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms