RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 MCM4P33991 863 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 PPM1LQ5SGD2 360 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 FOXD4L5Q5VV16 416 aaPredicted RBP20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 SPATA1Q5VX52 437 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 SLFN12LQ6IEE8 588 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 SHC4Q6S5L8 630 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 CRELD2Q6UXH1 353 aaPredicted RBP20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 RTL10Q7L3V2 364 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 CD302Q8IX05 232 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 FBXL6Q8N531 539 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 ZNF461Q8TAF7 563 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 SLC7A14Q8TBB6 771 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 FOXD4L4Q8WXT5 416 aaPredicted RBP20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 MRPL44Q9H9J2 332 aaKnown RBP20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 PCDHB8Q9UN66 801 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 CUTAO60888 179 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 GBP2P32456 591 aaPredicted RBP20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 ACOT2P49753 483 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 GUCY2FP51841 1108 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 CASP5P51878 434 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 POU5F1Q01860 360 aaKnown RBP20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 ADALQ6DHV7 355 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 JADE1Q6IE81 842 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 GRASPQ7Z6J2 395 aaPredicted RBP20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 FGFBP2Q9BYJ0 223 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 KCNH6Q9H252 994 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 KBTBD4Q9NVX7 518 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 IGSF9Q9P2J2 1179 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 FBXL5Q9UKA1 691 aa20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 AGO2Q9UKV8 859 aaKnown RBP20.56■□□□□ 0.88
HMGB3P22-201ENST00000442010 H7C4K7 107 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 PPEF2O14830 753 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 CCL16O15467 120 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 PDGFBP01127 241 aaPredicted RBP20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 HSP90AA1P07900 732 aaKnown RBP20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 NFICP08651 508 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 TDGQ13569 410 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 TNMDQ9H2S6 317 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 ASB7Q9H672 318 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 PANK4Q9NVE7 773 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 DERAQ9Y315 318 aa20.55■□□□□ 0.88
HMGB3P22-201ENST00000442010 ARHGEF37A1IGU5 675 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 XPOTO43592 962 aaKnown RBP20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 LAMP2P13473 410 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 IDEP14735 1019 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 NTHL1P78549 312 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 GET4Q7L5D6 327 aaPredicted RBP20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 APPL2Q8NEU8 664 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 RSAD2Q8WXG1 361 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 FAM122AQ96E09 287 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 ACCSQ96QU6 501 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 CUEDC2Q9H467 287 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 DUSP12Q9UNI6 340 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 C2CD2Q9Y426 696 aa20.54■□□□□ 0.88
HMGB3P22-201ENST00000442010 ANO9A1A5B4 782 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 ANHXE9PGG2 379 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 PIRO00625 290 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 XYLBO75191 536 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 OAZ2O95190 189 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 GCNT3O95395 438 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 ATF2P15336 505 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 FSHRP23945 695 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 POSTNQ15063 836 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 FOXD4L6Q3SYB3 417 aaPredicted RBP20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 CTXN3Q4LDR2 81 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 ATL3Q6DD88 541 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 ZNF280DQ6N043 979 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 CNNM4Q6P4Q7 775 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 FOXD4L3Q6VB84 417 aaPredicted RBP20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 TCEAL8Q8IYN2 117 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 SPRYD3Q8NCJ5 442 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 ZSWIM2Q8NEG5 633 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 BEST2Q8NFU1 509 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 POMGNT1Q8WZA1 660 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 FAM212AQ96EL1 285 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 HCFC1R1Q9NWW0 138 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 DNMT3BQ9UBC3 853 aaKnown RBP20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 PCDHA7Q9UN72 937 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 EXOC7Q9UPT5 735 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 PCDHB13Q9Y5F0 798 aa20.53■□□□□ 0.88
HMGB3P22-201ENST00000442010 SEC24AO95486 1093 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 VCPP55072 806 aaKnown RBP20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 LILRA4P59901 499 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 ALCAMQ13740 583 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 TMEM132DQ14C87 1099 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 IER5LQ5T953 404 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 C9orf57Q5W0N0 161 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 TPGS2Q68CL5 300 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 SUGP1Q8IWZ8 645 aaKnown RBP20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 KCNG4Q8TDN1 519 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 NXPE3Q969Y0 559 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 TRIM9Q9C026 710 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 ZFP37Q9Y6Q3 630 aaPredicted RBP20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 CACNA1HO95180 2353 aa20.52■□□□□ 0.88
HMGB3P22-201ENST00000442010 SPTLC1O15269 473 aa20.51■□□□□ 0.87
HMGB3P22-201ENST00000442010 ARPP19P56211 112 aa20.51■□□□□ 0.87
HMGB3P22-201ENST00000442010 WNT7BP56706 349 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms