RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 VCPIP1Q96JH7 1222 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 HHIPL1Q96JK4 782 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 FAM84AQ96KN4 292 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 WNT8AQ9H1J5 351 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 GOLPH3Q9H4A6 298 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 FAM53CQ9NYF3 392 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 CNOT8Q9UFF9 292 aaKnown RBP14.08□□□□□ -0.16
CPSF4-206ENST00000441580 TMEM59LQ9UK28 342 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 COG5Q9UP83 839 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 C2CD2Q9Y426 696 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 SCINQ9Y6U3 715 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-206ENST00000441580 CCDC66A2RUB6 948 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 DDX3YO15523 660 aaKnown RBP14.07□□□□□ -0.16
CPSF4-206ENST00000441580 DYNC1LI2O43237 492 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-206ENST00000441580 THAP12O43422 761 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 AKR1A1P14550 325 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 ARF4P18085 180 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-206ENST00000441580 GRM5P41594 1212 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 PSEN2P49810 448 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 MYL6P60660 151 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 NOMO3P69849 1222 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
CPSF4-206ENST00000441580 TMEM132DQ14C87 1099 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 ZNF667Q5HYK9 610 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 SEL1L2Q5TEA6 688 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 MON1BQ7L1V2 547 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 PHF13Q86YI8 300 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-206ENST00000441580 KIAA0319LQ8IZA0 1049 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 MCOLN2Q8IZK6 566 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 TTC39CQ8N584 583 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 ZBTB10Q96DT7 871 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 MS4A14Q96JA4 679 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 ZNF668Q96K58 619 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-206ENST00000441580 ZSWIM1Q9BR11 485 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 PLVAPQ9BX97 442 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 SLITRK6Q9H5Y7 841 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 VRTNQ9H8Y1 702 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 SMARCAL1Q9NZC9 954 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 ITGA11Q9UKX5 1188 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 DERAQ9Y315 318 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 CEP83Q9Y592 693 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 UMODL1Q5DID0 1318 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 MROH7Q68CQ1 1323 aa14.07□□□□□ -0.16
CPSF4-206ENST00000441580 GPR25O00155 361 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 HAS3O00219 553 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
CPSF4-206ENST00000441580 SPOPO43791 374 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 KPNA6O60684 536 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 STAU1O95793 577 aaKnown RBP14.06□□□□□ -0.16
CPSF4-206ENST00000441580 IGHA2P01877 340 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 NFICP08651 508 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 IQCF3P0C7M6 154 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 AXLP30530 894 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 CTNNA1P35221 906 aaKnown RBP14.06□□□□□ -0.16
CPSF4-206ENST00000441580 ASPAP45381 313 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 EPHB4P54760 987 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 FCGRTP55899 365 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 NAA35Q5VZE5 725 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 IFT20Q8IY31 132 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 CEP120Q8N960 986 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.06□□□□□ -0.163e-10■■■■■ 88.3
CPSF4-206ENST00000441580 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
CPSF4-206ENST00000441580 FUT8Q9BYC5 575 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 ZNF518BQ9C0D4 1074 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 XYLT2Q9H1B5 865 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 VIPAS39Q9H9C1 493 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 CYP3A43Q9HB55 503 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 MRPL47Q9HD33 250 aaKnown RBP14.06□□□□□ -0.16
CPSF4-206ENST00000441580 ACP6Q9NPH0 428 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 FLRT1Q9NZU1 646 aa14.06□□□□□ -0.16
CPSF4-206ENST00000441580 CITO14578 2027 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 A0A1B0GUA9 196 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 FAM155AB1AL88 458 aaPredicted RBP14.05□□□□□ -0.16
CPSF4-206ENST00000441580 MAP2K7O14733 419 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 MED7O43513 233 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 ALDH1A1P00352 501 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 CALB1P05937 261 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 PAEPP09466 180 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 GNAT1P11488 350 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 CYP2C9P11712 490 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 CYP2B6P20813 491 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 SLC1A1P43005 524 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 OSTNP61366 133 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 PAK2Q13177 524 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 CRHR2Q13324 411 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 NNTQ13423 1086 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 NOTUMQ6P988 496 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 SLC27A1Q6PCB7 646 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 EMBQ6PCB8 327 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 EIF1ADQ8N9N8 165 aaKnown RBP14.05□□□□□ -0.16
CPSF4-206ENST00000441580 KAT2BQ92831 832 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 CPB2Q96IY4 423 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 ACAP3Q96P50 834 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 PPP1R16BQ96T49 567 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 LRRC1Q9BTT6 524 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 BCO2Q9BYV7 579 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 ADAMTS10Q9H324 1103 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 PLEKHA5Q9HAU0 1116 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms