RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SLC22A17Q8WUG5 538 aa19.53■□□□□ 0.72
CPSF4-205ENST00000440514 ASB2Q96Q27 587 aa19.53■□□□□ 0.72
CPSF4-205ENST00000440514 GSDMAQ96QA5 445 aa19.53■□□□□ 0.72
CPSF4-205ENST00000440514 RXFP1Q9HBX9 757 aa19.53■□□□□ 0.72
CPSF4-205ENST00000440514 KIAA1586Q9HCI6 787 aa19.53■□□□□ 0.72
CPSF4-205ENST00000440514 DPP3Q9NY33 737 aa19.53■□□□□ 0.72
CPSF4-205ENST00000440514 UNC80Q8N2C7 3258 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 PDXKO00764 312 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 KIF20AO95235 890 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 SRGAP2BP0DMP2 458 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 AAK1Q2M2I8 961 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 NT5DC4Q86YG4 428 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
CPSF4-205ENST00000440514 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.52■□□□□ 0.72
CPSF4-205ENST00000440514 LNX1Q8TBB1 728 aaPredicted RBP19.52■□□□□ 0.72
CPSF4-205ENST00000440514 MSLNLQ96KJ4 702 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 SUSD3Q96L08 255 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 MTMR12Q9C0I1 747 aa19.52■□□□□ 0.72
CPSF4-205ENST00000440514 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.52■□□□□ 0.72
CPSF4-205ENST00000440514 XIRP2A4UGR9 3374 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 ANO9A1A5B4 782 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 SPTLC1O15269 473 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 EXOC3O60645 756 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 NR3C1P04150 777 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 ADH1AP07327 375 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 CLCN4P51793 760 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 CYP24A1Q07973 514 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 ZNF658Q5TYW1 1059 aaPredicted RBP19.51■□□□□ 0.71
CPSF4-205ENST00000440514 ISM2Q6H9L7 571 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 ANKRD54Q6NXT1 300 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 TMEM184AQ6ZMB5 413 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 CASP10Q92851 521 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 APOL5Q9BWW9 433 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 FNIP2Q9P278 1114 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 CD207Q9UJ71 328 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 MAN1B1Q9UKM7 699 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 SCN1AP35498 2009 aa19.51■□□□□ 0.71
CPSF4-205ENST00000440514 PIRO00625 290 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 ADAM12O43184 909 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 CALUO43852 315 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-205ENST00000440514 ITGB3P05106 788 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 TMEM191BP0C7N4 346 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 AARSP49588 968 aaKnown RBP eCLIP19.5■□□□□ 0.716e-7■■■■□ 19.6
CPSF4-205ENST00000440514 CASP4P49662 377 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 CREMQ03060 361 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 PSMD6Q15008 389 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 TJAP1Q5JTD0 557 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 VARS2Q5ST30 1063 aaKnown RBP19.5■□□□□ 0.71
CPSF4-205ENST00000440514 SCARA3Q6AZY7 606 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 PTCRAQ6ISU1 281 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-205ENST00000440514 PPFIBP1Q86W92 1011 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 GPR65Q8IYL9 337 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 C1orf127Q8N9H9 656 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 OR5B17Q8NGF7 314 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 CCDC127Q96BQ5 260 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 GBP4Q96PP9 640 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 DMAC2Q9NW81 257 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 MTRRQ9UBK8 725 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 PCDHB8Q9UN66 801 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 TRAF3IP3Q9Y228 551 aa19.5■□□□□ 0.71
CPSF4-205ENST00000440514 GRXCR2A6NFK2 248 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 SYN3O14994 580 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 DLATP10515 647 aaKnown RBP19.49■□□□□ 0.71
CPSF4-205ENST00000440514 IL9P15248 144 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 POLR2BP30876 1174 aaKnown RBP19.49■□□□□ 0.71
CPSF4-205ENST00000440514 PRCPP42785 496 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 CAMK4Q16566 473 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 ZCWPW2Q504Y3 356 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 SYCE2Q6PIF2 218 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 RSPO2Q6UXX9 243 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-205ENST00000440514 DSTYKQ6XUX3 929 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 PALB2Q86YC2 1186 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 SLC9A9Q8IVB4 645 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 SMRP1Q8NCR6 262 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 PLEKHO2Q8TD55 490 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 CGRRF1Q99675 332 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 CLSTN3Q9BQT9 956 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-205ENST00000440514 LMBRD1Q9NUN5 540 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 INTS13Q9NVM9 706 aa19.49■□□□□ 0.71
CPSF4-205ENST00000440514 TIMM13Q9Y5L4 95 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-205ENST00000440514 M0QZQ0 153 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 BIN1O00499 593 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 MBTPS2O43462 519 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 GLUD1P00367 558 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 SPATA31D3P0C874 917 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 BMP1P13497 986 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 NR2F2P24468 414 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 TAF6P49848 677 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 LILRA4P59901 499 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 SMAD4Q13485 552 aaKnown RBP19.48■□□□□ 0.71
CPSF4-205ENST00000440514 SURF1Q15526 300 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 CEP135Q66GS9 1140 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 PDXDC1Q6P996 788 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 SPATA31D4Q6ZUB0 917 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 ANKS3Q6ZW76 656 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 WDR49Q8IV35 697 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 C12orf76Q8N812 135 aaPredicted RBP19.48■□□□□ 0.71
CPSF4-205ENST00000440514 CXorf38Q8TB03 319 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 FEZF2Q8TBJ5 459 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms