RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 IGHA2P01877 340 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 MYBL1P10243 752 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 ACADSP16219 412 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 TAC1P20366 129 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 OSBPP22059 807 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 CNGA1P29973 690 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 KLC1Q07866 573 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
HPS4-206ENST00000439453 CYP1B1Q16678 543 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 TMEM154Q6P9G4 183 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 ARHGEF18Q6ZSZ5 1173 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 RHOT2Q8IXI1 618 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 GALNT15Q8N3T1 639 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 TMEM237Q96Q45 408 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 PITPNM3Q9BZ71 974 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 PIDD1Q9HB75 910 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 AAASQ9NRG9 546 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 TYW1Q9NV66 732 aaKnown RBP9.12□□□□□ -0.95
HPS4-206ENST00000439453 NKIRAS1Q9NYS0 192 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 ZNF214Q9UL59 606 aaPredicted RBP9.12□□□□□ -0.95
HPS4-206ENST00000439453 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
HPS4-206ENST00000439453 ZNF536O15090 1300 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 TCRBV7S2A1N4TA0A589 114 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 CLIC2O15247 247 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 KCNJ1P48048 391 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 GIT2Q14161 759 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 TMEM132BQ14DG7 1078 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 TSNAXIP1Q2TAA8 658 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 C11orf63Q6NUN7 778 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 PALB2Q86YC2 1186 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.11□□□□□ -0.95
HPS4-206ENST00000439453 ERP27Q96DN0 273 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 HAO1Q9UJM8 370 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 C2CD2Q9Y426 696 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 ASTN1O14525 1302 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 MED24O75448 989 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 EYA4O95677 639 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 TARSP26639 723 aaKnown RBP9.11□□□□□ -0.95
HPS4-206ENST00000439453 ALDH3A1P30838 453 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 FOXN2P32314 431 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 POLGP54098 1239 aaPredicted RBP9.11□□□□□ -0.95
HPS4-206ENST00000439453 HADHBP55084 474 aaKnown RBP9.11□□□□□ -0.95
HPS4-206ENST00000439453 LMNB2Q03252 620 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 STRN3Q13033 797 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 SLFN13Q68D06 897 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 FAM47EQ6ZV65 393 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 LONP2Q86WA8 852 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 ZFAND2BQ8WV99 257 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 DNAJC9Q8WXX5 260 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 USP6NLQ92738 828 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 INPP5DQ92835 1189 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 RPS6KC1Q96S38 1066 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 CTTNBP2NLQ9P2B4 639 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 MTUS1Q9ULD2 1270 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 POTEFA5A3E0 1075 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 PLA2G6O60733 806 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 PTDSS1P48651 473 aaKnown RBP9.11□□□□□ -0.95
HPS4-206ENST00000439453 PABPC4Q13310 644 aaKnown RBP eCLIP9.11□□□□□ -0.95
HPS4-206ENST00000439453 SLC5A9Q2M3M2 681 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 WASHC2DQ5SRD0 308 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 POP1Q99575 1024 aaKnown RBP9.11□□□□□ -0.95
HPS4-206ENST00000439453 GPR88Q9GZN0 384 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 GJD2Q9UKL4 321 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 GABRQQ9UN88 632 aa9.11□□□□□ -0.95
HPS4-206ENST00000439453 H0Y3Z8 333 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 VWA5AO00534 786 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 PYGMP11217 842 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 SP100P23497 879 aaPredicted RBP9.1□□□□□ -0.95
HPS4-206ENST00000439453 CHKAP35790 457 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 STAT3P40763 770 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 COG2Q14746 738 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 PDCD2Q16342 344 aaPredicted RBP9.1□□□□□ -0.95
HPS4-206ENST00000439453 SEPT14Q6ZU15 432 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 APBB1IPQ7Z5R6 666 aaPredicted RBP9.1□□□□□ -0.95
HPS4-206ENST00000439453 SLC13A5Q86YT5 568 aaPredicted RBP9.1□□□□□ -0.95
HPS4-206ENST00000439453 CYP4X1Q8N118 509 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 TTC8Q8TAM2 541 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 BORCS6Q96GS4 357 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 REEP2Q9BRK0 252 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 TBC1D10AQ9BXI6 508 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 MCOLN1Q9GZU1 580 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 CHKBQ9Y259 395 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 SLC26A4O43511 780 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 ECEL1O95672 775 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 TTC4O95801 387 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 YARSP54577 528 aaKnown RBP9.1□□□□□ -0.95
HPS4-206ENST00000439453 PPP1R15BQ5SWA1 713 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 MTHFD1LQ6UB35 978 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 PPP1R21Q6ZMI0 780 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 KCTD1Q719H9 257 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 CTU1Q7Z7A3 348 aaKnown RBP9.1□□□□□ -0.95
HPS4-206ENST00000439453 LRRC37BQ96QE4 947 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 WHRNQ9P202 907 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 FRMPD4Q14CM0 1322 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 MAPK13O15264 365 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 TP73O15350 636 aa9.1□□□□□ -0.95
HPS4-206ENST00000439453 TAL1P17542 331 aaPredicted RBP9.1□□□□□ -0.95
HPS4-206ENST00000439453 COMTP21964 271 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms