RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SYTL2Q9HCH5 934 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ASAP2O43150 1006 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ZFXP17010 805 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 NEDD1Q8NHV4 660 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ATG4CQ96DT6 458 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 PNKPQ96T60 521 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ECT2Q9H8V3 914 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 TUFT1Q9NNX1 390 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ITIH6Q6UXX5 1313 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 TNS3Q68CZ2 1445 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 CRB1P82279 1406 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 PVALEFA0A1B0GWK0 134 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 RTN2O75298 545 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 AVPR1AP37288 418 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ARFIP2P53365 341 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 LRRC36Q1X8D7 754 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 GJB7Q6PEY0 223 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 FMR1NBQ8N0W7 255 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 SMARCAL1Q9NZC9 954 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 TRIM10Q9UDY6 481 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 NRKQ7Z2Y5 1582 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 GRIN3BO60391 1043 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ZC3H11AO75152 810 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ITGB3P05106 788 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 NR3C2P08235 984 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 USP10Q14694 798 aaKnown RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 NBPF20Q3BBV1 942 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 PATL1Q86TB9 770 aaKnown RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 RBBP8NLQ8NC74 664 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 PRMT1Q99873 361 aaKnown RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 SHCBP1LQ9BZQ2 653 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 TMEM60Q9H2L4 133 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 MAFGO15525 162 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 MYBL1P10243 752 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 HARS2P49590 506 aaKnown RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 CHSY1Q86X52 802 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 RNF168Q8IYW5 571 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 LRRC37BQ96QE4 947 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 TAAR1Q96RJ0 339 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 EML4Q9HC35 981 aaKnown RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 FBXO28Q9NVF7 368 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ARHGAP26Q9UNA1 814 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 CDHR2Q9BYE9 1310 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TCF7P36402 384 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 XKR3Q5GH77 459 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 C1orf131Q8NDD1 294 aaKnown RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TRIM62Q9BVG3 475 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 PCMTD2Q9NV79 361 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 LIMA1Q9UHB6 759 aaKnown RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 DBR1Q9UK59 544 aaKnown RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 DGKIO75912 1065 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 HAUS5O94927 633 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 NPEPPSP55786 919 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 C16orf87Q6PH81 154 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 RNF180Q86T96 592 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TRIM51Q9BSJ1 452 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 ATP11BQ9Y2G3 1177 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 PITPNM2Q9BZ72 1349 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 PYGBP11216 843 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 GTF2H1P32780 548 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TRIM72Q6ZMU5 477 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 YME1L1Q96TA2 773 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 FAM167BQ9BTA0 163 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TSSK1BQ9BXA7 367 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 ADNPQ9H2P0 1102 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TASP1Q9H6P5 420 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TAL1P17542 331 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 LONRF1Q17RB8 773 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CACUL1Q86Y37 369 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 TRMT2AQ8IZ69 625 aaKnown RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CHP1Q99653 195 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 NDUFB5O43674 189 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CSDE1O75534 798 aaKnown RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CHRM3P20309 590 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CPT1AP50416 773 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 FCGRTP55899 365 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 SHCBP1Q8NEM2 672 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 BRD8Q9H0E9 1235 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CETPP11597 493 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 SREBF2Q12772 1141 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CDH18Q13634 790 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 RPAINQ86UA6 219 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 ST13P4Q8IZP2 240 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-206ENST00000438092 ICA1LQ8NDH6 482 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 SENP7Q9BQF6 1050 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 RRAGCQ9HB90 399 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CPA4Q9UI42 421 aa10.85□□□□□ -0.67
SHPRH-206ENST00000438092 CCDC151A5D8V7 595 aa10.84□□□□□ -0.67
SHPRH-206ENST00000438092 ENO3P13929 434 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-206ENST00000438092 CAPZA2P47755 286 aa10.84□□□□□ -0.67
SHPRH-206ENST00000438092 ATP2C1P98194 919 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-206ENST00000438092 COG1Q8WTW3 980 aa10.84□□□□□ -0.67
SHPRH-206ENST00000438092 SPIRE2Q8WWL2 714 aa10.84□□□□□ -0.67
SHPRH-206ENST00000438092 MED15Q96RN5 788 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms