RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 CTGFP29279 349 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 GRIA3P42263 894 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 SLC5A3P53794 718 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 SCAND1P57086 179 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 EXOSC10Q01780 885 aaKnown RBP4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 MTM1Q13496 603 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 SEPT2Q15019 361 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 EZH2Q15910 746 aaKnown RBP4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 KIAA1614Q5VZ46 1190 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 KIAA0895LQ68EN5 471 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 JAZF1Q86VZ6 243 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 HASPINQ8TF76 798 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 TFAP2BQ92481 460 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 ORAI2Q96SN7 254 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 MANSC1Q9H8J5 431 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 INTS13Q9NVM9 706 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 A0A1W2PS29 197 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 WDR91A4D1P6 747 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 WIPF3A6NGB9 483 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 SLC6A9P48067 706 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 SRSF7Q16629 238 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 CLNKQ7Z7G1 428 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 RNF180Q86T96 592 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 ZNF366Q8N895 744 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 TOR1AIP2Q8NFQ8 470 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 NLGN4YQ8NFZ3 816 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 DDB2Q92466 427 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 DNAJC28Q9NX36 388 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 DNM3Q9UQ16 869 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 WNT6Q9Y6F9 365 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 KAT6AQ92794 2004 aa4.5□□□□□ -1.69
HMGB1P31-201ENST00000437242 PRAMEF33A0A0G2JMD5 474 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 PROM1O43490 865 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 PRAMEF10O60809 474 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 HAUS5O94927 633 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 AMY1AP04745 511 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 PRKCGP05129 697 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 OSMP13725 252 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 DDCP20711 480 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 SOX10P56693 466 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 RPS7P62081 194 aaKnown RBP4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 AMIGO2Q86SJ2 522 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 ZGPATQ8N5A5 531 aaKnown RBP4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 Q8NA96 180 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 DPF1Q92782 380 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 C11orf54Q9H0W9 315 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 CDYLQ9Y232 598 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 PCDHGA2Q9Y5H1 932 aa4.49□□□□□ -1.69
HMGB1P31-201ENST00000437242 MYBBP1AQ9BQG0 1328 aaKnown RBP4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 CHRM2P08172 466 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 CELA2AP08217 269 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 KCNA2P16389 499 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 FPGSQ05932 587 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 MAPK7Q13164 816 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 PREPLQ4J6C6 727 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 DACT2Q5SW24 774 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 FCRLBQ6BAA4 426 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 C9orf106Q8NAJ2 232 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 SLC30A5Q8TAD4 765 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 LPIN2Q92539 896 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 PGBD1Q96JS3 809 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 TLR10Q9BXR5 811 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 CCM2LQ9NUG4 571 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 C14orf119Q9NWQ9 140 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 NEU2Q9Y3R4 380 aa4.48□□□□□ -1.69
HMGB1P31-201ENST00000437242 BRINP1O60477 761 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 ITPKBP27987 946 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 ATP8B2P98198 1209 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 ZNF844Q08AG5 666 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 PTPRRQ15256 657 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 TXNRD1Q16881 649 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 FAM153CQ494X1 144 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 ZNF425Q6IV72 752 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 TSHZ1Q6ZSZ6 1077 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 STRA8Q7Z7C7 330 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 UBR7Q8N806 425 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 Q8N9P0 234 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 OR2I1PQ8NGU4 316 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 MYCBPAPQ8TBZ2 947 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 C7orf25Q9BPX7 421 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 VTA1Q9NP79 307 aa4.47□□□□□ -1.69
HMGB1P31-201ENST00000437242 LINC00473A8K010 186 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 ADM5C9JUS6 153 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 ENPP3O14638 875 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 IKBKBO14920 756 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 AGFG2O95081 481 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 SOX5P35711 763 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 CTXN1P60606 82 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 FAPQ12884 760 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 SLC10A2Q12908 348 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 CD300EQ496F6 205 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 PDPRQ8NCN5 879 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 B3GALNT2Q8NCR0 500 aa4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 AHCYL2Q96HN2 611 aaKnown RBP4.46□□□□□ -1.7
HMGB1P31-201ENST00000437242 GCOM1H8Y6P7 765 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P31-201ENST00000437242 TOR1BO14657 336 aa4.45□□□□□ -1.7
HMGB1P31-201ENST00000437242 ELFN1P0C7U0 828 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms