RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ICAM1P05362 532 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 AFF4Q9UHB7 1163 aaKnown RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 SSU72P8A0A1W2PR75 194 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 GMNCA6NCL1 334 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 RGS2P41220 211 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 GMPSP49915 693 aaPredicted RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 RNF135Q8IUD6 432 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 ELOA2Q8IYF1 753 aaPredicted RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 CALML6Q8TD86 181 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 PPP2R3BQ9Y5P8 575 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 A0A1B0GTH6 734 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 F5H423 210 aaPredicted RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 ARHGEF7Q14155 803 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 CLEC17AQ6ZS10 378 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 SRGNP10124 158 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 CATSPER1Q8NEC5 780 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 MKNK1Q9BUB5 465 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 SMG5Q9UPR3 1016 aaKnown RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 GPR75-ASB3A0A0A6YYF3 556 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 H7C4K7 107 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 SSTR3P32745 418 aaPredicted RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 PDK1Q15118 436 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 FAM129AQ9BZQ8 928 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 OLFML3Q9NRN5 406 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 CHUKO15111 745 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 SPAG6O75602 509 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 GFAPP14136 432 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 NCAPHQ15003 741 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 ATP6V1G3Q96LB4 118 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 CLCA2Q9UQC9 943 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 SERPINB9P50453 376 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 C1orf54Q8WWF1 131 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 USP13Q92995 863 aaPredicted RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 ZNF512Q96ME7 567 aaPredicted RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 ADA2Q9NZK5 511 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 E2F5Q15329 346 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 EFHC1Q5JVL4 640 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 DMTNQ08495 405 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 NAF1Q96HR8 494 aaKnown RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 SEPT5Q99719 369 aaPredicted RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 XPO7Q9UIA9 1087 aaKnown RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 HIST1H2AGP0C0S8 130 aaPredicted RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 HIST1H2ADP20671 130 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 MAP3K10Q02779 954 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 MED21Q13503 144 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 PATL1Q86TB9 770 aaKnown RBP16.66■□□□□ 0.26
PTPN13-204ENST00000436978 HIST1H2AHQ96KK5 128 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 HIST1H2AJQ99878 128 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 H2AFJQ9BTM1 129 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 CASS4Q9NQ75 786 aa16.66■□□□□ 0.26
PTPN13-204ENST00000436978 NCK2O43639 380 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 HAUS5O94927 633 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 ACTR2P61160 394 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 TECPR2O15040 1411 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 RPSAP08865 295 aaKnown RBP16.65■□□□□ 0.26
PTPN13-204ENST00000436978 RASA1P20936 1047 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 ZNF467Q7Z7K2 595 aaPredicted RBP16.65■□□□□ 0.26
PTPN13-204ENST00000436978 RBBP8NLQ8NC74 664 aaPredicted RBP16.65■□□□□ 0.26
PTPN13-204ENST00000436978 NOP53Q9NZM5 478 aaKnown RBP16.65■□□□□ 0.26
PTPN13-204ENST00000436978 SLC2A3P11169 496 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 ARFIP2P53365 341 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 OR9Q1Q8NGQ5 310 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 CPA5Q8WXQ8 436 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 BRAFP15056 766 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 RPA1P27694 616 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 TRIML2Q8N7C3 387 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 DEFB129Q9H1M3 183 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 TMEM39BQ9GZU3 492 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 RSAD1Q9HA92 442 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 NEURL4Q96JN8 1562 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 STAG3L1P0CL83 205 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 CYP2C9P11712 490 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 HMOX2P30519 316 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 CD302Q8IX05 232 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 SLC7A14Q8TBB6 771 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 SYN2Q92777 582 aaPredicted RBP16.65■□□□□ 0.26
PTPN13-204ENST00000436978 PCDHB2Q9Y5E7 798 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 SNX5Q9Y5X3 404 aa16.65■□□□□ 0.26
PTPN13-204ENST00000436978 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.26
PTPN13-204ENST00000436978 NDUFS3O75489 264 aa16.64■□□□□ 0.26
PTPN13-204ENST00000436978 ARHGEF38Q9NXL2 777 aa16.64■□□□□ 0.26
PTPN13-204ENST00000436978 VPS9D1Q9Y2B5 631 aa16.64■□□□□ 0.26
PTPN13-204ENST00000436978 POLRMTO00411 1230 aaKnown RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 APRTP07741 180 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 KRT72Q14CN4 511 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 PTPRN2Q92932 1015 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 HPDLQ96IR7 371 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 DDX47Q9H0S4 455 aaKnown RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 UCHL3P15374 230 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 PDGFRAP16234 1089 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 GNL1P36915 607 aaPredicted RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 LINC00523Q86TU6 105 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms