RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 LINC00271P0C7V0 271 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 CYP3A5P20815 502 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 PIK3CAP42336 1068 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 BCAR1P56945 870 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 NCOA4Q13772 614 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 UPP1Q16831 310 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 SP7Q8TDD2 431 aaPredicted RBP18.1■□□□□ 0.49
CALD1-209ENST00000436461 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.09■□□□□ 0.49
CALD1-209ENST00000436461 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.09■□□□□ 0.49
CALD1-209ENST00000436461 ANO9A1A5B4 782 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 LRRC10BA6NIK2 292 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 STX10O60499 249 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 LRPAP1P30533 357 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 GTF2H1P32780 548 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 AP3M2P53677 418 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 MYL6P60660 151 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 APBA1Q02410 837 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 SPOPLQ6IQ16 392 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 BCL7CQ8WUZ0 217 aaPredicted RBP18.09■□□□□ 0.49
CALD1-209ENST00000436461 TSPAN18Q96SJ8 248 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 IFNKQ9P0W0 207 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 LINC01553A4QN01 128 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 LGALS16A8MUM7 142 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 I3L4J1 428 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 PIRO00625 290 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 SPTLC1O15269 473 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 B3GAT3O94766 335 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 TRPC3Q13507 836 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 CD300LGQ6UXG3 332 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 MARCH5Q9NX47 278 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
CALD1-209ENST00000436461 ALDH2P05091 517 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 TPM2P07951 284 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 BRCC3P46736 316 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 KLK7P49862 253 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 UBASH3AP57075 661 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 RBP5P82980 135 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 UBXN1Q04323 297 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 LRMPQ12912 555 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 EPC2Q52LR7 807 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 KCNT2Q6UVM3 1135 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 COLGALT1Q8NBJ5 622 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 FBXL13Q8NEE6 735 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 C17orf80Q9BSJ5 609 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 NKX2-4Q9H2Z4 354 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 RTN4Q9NQC3 1192 aaKnown RBP18.08■□□□□ 0.48
CALD1-209ENST00000436461 RAB20Q9NX57 234 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 GCNT4Q9P109 453 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 PCDHA11Q9Y5I1 949 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 PLXNA4Q9HCM2 1894 aa18.08■□□□□ 0.48
CALD1-209ENST00000436461 A0A1B0GTH6 734 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 SLC9A1P19634 815 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 ALDH7A1P49419 539 aaKnown RBP18.07■□□□□ 0.48
CALD1-209ENST00000436461 KCNMA1Q12791 1236 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 RSPH1Q8WYR4 309 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 HPDLQ96IR7 371 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 UROC1Q96N76 676 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 TMEM175Q9BSA9 504 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 XPO4Q9C0E2 1151 aaKnown RBP18.07■□□□□ 0.48
CALD1-209ENST00000436461 XYLT2Q9H1B5 865 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 CERS4Q9HA82 394 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 APOBEC3GQ9HC16 384 aaKnown RBP18.07■□□□□ 0.48
CALD1-209ENST00000436461 COQ4Q9Y3A0 265 aa18.07■□□□□ 0.48
CALD1-209ENST00000436461 N4BP1O75113 896 aaKnown RBP18.06■□□□□ 0.48
CALD1-209ENST00000436461 LAG3P18627 525 aa18.06■□□□□ 0.48
CALD1-209ENST00000436461 RPL9P32969 192 aaKnown RBP18.06■□□□□ 0.48
CALD1-209ENST00000436461 LILRA4P59901 499 aa18.06■□□□□ 0.48
CALD1-209ENST00000436461 LMO3Q8TAP4 145 aa18.06■□□□□ 0.48
CALD1-209ENST00000436461 CLP1Q92989 425 aaKnown RBP18.06■□□□□ 0.48
CALD1-209ENST00000436461 DDX27Q96GQ7 796 aaKnown RBP18.06■□□□□ 0.48
CALD1-209ENST00000436461 ZNF558Q96NG5 402 aa18.06■□□□□ 0.48
CALD1-209ENST00000436461 POLIQ9UNA4 740 aa18.06■□□□□ 0.48
CALD1-209ENST00000436461 R3HCC1Q9Y3T6 440 aaKnown RBP18.06■□□□□ 0.48
CALD1-209ENST00000436461 NUB1Q9Y5A7 615 aa18.06■□□□□ 0.48
CALD1-209ENST00000436461 VWA8A3KMH1 1905 aa18.06■□□□□ 0.48
CALD1-209ENST00000436461 TAP1Q03518 808 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 NR1I3Q14994 352 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 EXOC3L4Q17RC7 722 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 ZNF699Q32M78 642 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 FILIP1LQ4L180 1135 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 TIGD5Q53EQ6 642 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 DCLRE1AQ6PJP8 1040 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 GBP6Q6ZN66 633 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 TATDN2Q93075 761 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 INTS2Q9H0H0 1204 aaKnown RBP18.05■□□□□ 0.48
CALD1-209ENST00000436461 NXF1Q9UBU9 619 aaKnown RBP18.05■□□□□ 0.48
CALD1-209ENST00000436461 P4HA2O15460 535 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 TADA2AO75478 443 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 CSPG5O95196 566 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 ASS1P00966 412 aaKnown RBP18.05■□□□□ 0.48
CALD1-209ENST00000436461 DNAJB2P25686 324 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 PON1P27169 355 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 CTNNB1P35222 781 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 TAF6P49848 677 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 NOP14P78316 857 aaKnown RBP18.05■□□□□ 0.48
CALD1-209ENST00000436461 SYCP1Q15431 976 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 WDR72Q3MJ13 1102 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 FKBP15Q5T1M5 1219 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms