RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 CUL9Q8IWT3 2517 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 PIRO00625 290 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 TEX28O15482 410 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 RBM10P98175 930 aaKnown RBP19.9■□□□□ 0.78
HLA-F-220ENST00000434407 MYBPC2Q14324 1141 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 SNRNP35Q16560 246 aaKnown RBP19.9■□□□□ 0.78
HLA-F-220ENST00000434407 NFIL3Q16649 462 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 KIAA1841Q6NSI8 718 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 PPFIBP1Q86W92 1011 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 LNX1Q8TBB1 728 aaPredicted RBP19.9■□□□□ 0.78
HLA-F-220ENST00000434407 RIN2Q8WYP3 895 aaPredicted RBP19.9■□□□□ 0.78
HLA-F-220ENST00000434407 ERCC4Q92889 916 aaPredicted RBP19.9■□□□□ 0.78
HLA-F-220ENST00000434407 SMARCE1Q969G3 411 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 PDE11AQ9HCR9 933 aa19.9■□□□□ 0.78
HLA-F-220ENST00000434407 C2CD2LO14523 706 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 PPEF2O14830 753 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 SYN3O14994 580 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 PAX3P23760 479 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 CYP2J2P51589 502 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 CLCN4P51793 760 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 CREMQ03060 361 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 SURF1Q15526 300 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 ZNF658Q5TYW1 1059 aaPredicted RBP19.89■□□□□ 0.77
HLA-F-220ENST00000434407 C9orf57Q5W0N0 161 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 PDXDC1Q6P996 788 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.89■□□□□ 0.77
HLA-F-220ENST00000434407 CXorf38Q8TB03 319 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 GTPBP4Q9BZE4 634 aaKnown RBP19.89■□□□□ 0.77
HLA-F-220ENST00000434407 DPP3Q9NY33 737 aa19.89■□□□□ 0.77
HLA-F-220ENST00000434407 H3BQ06 376 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-220ENST00000434407 M0QZQ0 153 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 ADH1AP07327 375 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 BMP1P13497 986 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 TKTP29401 623 aaKnown RBP19.88■□□□□ 0.77
HLA-F-220ENST00000434407 CA8P35219 290 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 NDUFV1P49821 464 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 CYP24A1Q07973 514 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 MRPL58Q14197 206 aaKnown RBP19.88■□□□□ 0.77
HLA-F-220ENST00000434407 ZCWPW2Q504Y3 356 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 PRSS55Q6UWB4 352 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-220ENST00000434407 CACTINQ8WUQ7 758 aaKnown RBP19.88■□□□□ 0.77
HLA-F-220ENST00000434407 CASP10Q92851 521 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 MFSD14AQ96MC6 490 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 CLSTN3Q9BQT9 956 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 GZF1Q9H116 711 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-220ENST00000434407 BARX2Q9UMQ3 279 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-220ENST00000434407 NUB1Q9Y5A7 615 aa19.88■□□□□ 0.77
HLA-F-220ENST00000434407 I3L4J1 428 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 KLRC2P26717 231 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 KCNQ1P51787 676 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 LILRA4P59901 499 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 PSMD6Q15008 389 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 PSMD5Q16401 504 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 PUS10Q3MIT2 529 aaKnown RBP19.87■□□□□ 0.77
HLA-F-220ENST00000434407 TJAP1Q5JTD0 557 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 ANKRD54Q6NXT1 300 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 SYCE2Q6PIF2 218 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 EP400NLQ6ZTU2 488 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 CEP57Q86XR8 500 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 SMYD4Q8IYR2 804 aaPredicted RBP19.87■□□□□ 0.77
HLA-F-220ENST00000434407 C1orf127Q8N9H9 656 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 SMRP1Q8NCR6 262 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 LMBRD1Q9NUN5 540 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 INTS13Q9NVM9 706 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 MTRRQ9UBK8 725 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 CD207Q9UJ71 328 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 MAPK8IP1Q9UQF2 711 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 BACE2Q9Y5Z0 518 aa19.87■□□□□ 0.77
HLA-F-220ENST00000434407 PTPRJQ12913 1337 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 CALUO43852 315 aaPredicted RBP19.86■□□□□ 0.77
HLA-F-220ENST00000434407 TBC1D4O60343 1298 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 EXOC3O60645 756 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 NR3C1P04150 777 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 SRGAP2BP0DMP2 458 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 EPCAMP16422 314 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 HOXB8P17481 243 aaPredicted RBP19.86■□□□□ 0.77
HLA-F-220ENST00000434407 MCM4P33991 863 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 PRCPP42785 496 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 TFAMQ00059 246 aaKnown RBP19.86■□□□□ 0.77
HLA-F-220ENST00000434407 LLGL2Q6P1M3 1020 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 LILRA6Q6PI73 481 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 ANKS3Q6ZW76 656 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 RDH13Q8NBN7 331 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 NOC3LQ8WTT2 800 aaKnown RBP19.86■□□□□ 0.77
HLA-F-220ENST00000434407 S1PR5Q9H228 398 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 MAN1B1Q9UKM7 699 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 PCDHB8Q9UN66 801 aa19.86■□□□□ 0.77
HLA-F-220ENST00000434407 BDP1A6H8Y1 2624 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 GRXCR2A6NFK2 248 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 SPTLC1O15269 473 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 PAPLNO95428 1278 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 RPL17P18621 184 aaKnown RBP19.85■□□□□ 0.77
HLA-F-220ENST00000434407 SMAD4Q13485 552 aaKnown RBP19.85■□□□□ 0.77
HLA-F-220ENST00000434407 VARS2Q5ST30 1063 aaKnown RBP19.85■□□□□ 0.77
HLA-F-220ENST00000434407 CENPPQ6IPU0 288 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 WDR49Q8IV35 697 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 APPL2Q8NEU8 664 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 BORCS6Q96GS4 357 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 GBP4Q96PP9 640 aa19.85■□□□□ 0.77
HLA-F-220ENST00000434407 DZANK1Q9NVP4 752 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms