RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP54-206ENST00000433394 USP19O94966 1318 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 CXorf49A8MYA2 514 aaPredicted RBP7.2□□□□□ -1.26
USP54-206ENST00000433394 NPIPB6E9PJ23 425 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 APOL1O14791 398 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 TBX3O15119 743 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 HOXA3O43365 443 aaPredicted RBP7.2□□□□□ -1.26
USP54-206ENST00000433394 THAP12O43422 761 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 IPO13O94829 963 aaKnown RBP7.2□□□□□ -1.26
USP54-206ENST00000433394 GJB1P08034 283 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 RARBP10826 455 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 CR2P20023 1033 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 MGAT1P26572 445 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 RPS19P39019 145 aaKnown RBP7.2□□□□□ -1.26
USP54-206ENST00000433394 SLC13A2Q13183 592 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 KIF22Q14807 665 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 ACAP1Q15027 740 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 AMOTQ4VCS5 1084 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 MFSD14BQ5SR56 506 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 MCTP1Q6DN14 999 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 PGBD2Q6P3X8 592 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 FAM111BQ6SJ93 734 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 PDSS2Q86YH6 399 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 LIX1LQ8IVB5 337 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 CCT6BQ92526 530 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 MBD6Q96DN6 1003 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 IQCDQ96DY2 449 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 MSLNLQ96KJ4 702 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 LMF1Q96S06 567 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 COLEC11Q9BWP8 271 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 BRIP1Q9BX63 1249 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 EIF2AQ9BY44 585 aaKnown RBP7.2□□□□□ -1.26
USP54-206ENST00000433394 TRIM54Q9BYV2 358 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 ZNF518BQ9C0D4 1074 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 REXO4Q9GZR2 422 aaKnown RBP7.2□□□□□ -1.26
USP54-206ENST00000433394 SEC61A2Q9H9S3 476 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 PTPRHQ9HD43 1115 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 OAZ3Q9UMX2 235 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 MED16Q9Y2X0 877 aa7.2□□□□□ -1.26
USP54-206ENST00000433394 TCRBV7S2A1N4TA0A589 114 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 BTN3A1O00481 513 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 MFAP3LO75121 409 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 SLC43A1O75387 559 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 SLURP1P55000 103 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 STARD3Q14849 445 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 FKBP15Q5T1M5 1219 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 ATXN7L2Q5T6C5 722 aaPredicted RBP7.19□□□□□ -1.26
USP54-206ENST00000433394 ZNF365Q70YC5 407 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 ADGRE4PQ86SQ3 457 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 COL23A1Q86Y22 540 aaPredicted RBP7.19□□□□□ -1.26
USP54-206ENST00000433394 SP8Q8IXZ3 490 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 SYTL1Q8IYJ3 562 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 TFAP2CQ92754 450 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 NMD3Q96D46 503 aaKnown RBP7.19□□□□□ -1.26
USP54-206ENST00000433394 NEIL1Q96FI4 390 aaPredicted RBP7.19□□□□□ -1.26
USP54-206ENST00000433394 CEP95Q96GE4 821 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 BORCS6Q96GS4 357 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 MRGPRX1Q96LB2 322 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 P2RX7Q99572 595 aaKnown RBP7.19□□□□□ -1.26
USP54-206ENST00000433394 ZSCAN32Q9NX65 697 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 GPRC5BQ9NZH0 403 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 ATRNL1Q5VV63 1379 aa7.19□□□□□ -1.26
USP54-206ENST00000433394 PAX4O43316 350 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 MATN4O95460 622 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 CHEK2O96017 543 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 ABCB4P21439 1286 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 PPM1AP35813 382 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 ICA1Q05084 483 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 TRIM14Q14142 442 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 ARL13BQ3SXY8 428 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 EFCAB12Q6NXP0 572 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 DOK3Q7L591 496 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 UBE3BQ7Z3V4 1068 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 SKAP1Q86WV1 359 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 SMAP1Q8IYB5 467 aaPredicted RBP7.18□□□□□ -1.26
USP54-206ENST00000433394 TXLNBQ8N3L3 684 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 MPP5Q8N3R9 675 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 FITM2Q8N6M3 262 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 DCBLD1Q8N8Z6 715 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 ZNF512Q96ME7 567 aaPredicted RBP7.18□□□□□ -1.26
USP54-206ENST00000433394 CPPED1Q9BRF8 314 aaPredicted RBP7.18□□□□□ -1.26
USP54-206ENST00000433394 ENKD1Q9H0I2 346 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 SPON1Q9HCB6 807 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 POGKQ9P215 609 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 PLEKHM1Q9Y4G2 1056 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 RNF114Q9Y508 228 aa7.18□□□□□ -1.26
USP54-206ENST00000433394 TBKBP1A7MCY6 615 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 ADAMTS3O15072 1205 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 FGF18O76093 207 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 XRCC6P12956 609 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP54-206ENST00000433394 HDCP19113 662 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 PHKA1P46020 1223 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 ARFIP2P53365 341 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 PSMC1P62191 440 aaKnown RBP7.17□□□□□ -1.26
USP54-206ENST00000433394 PPP2CBP62714 309 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 PPP2CAP67775 309 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 ADAM8P78325 824 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 VMACQ2NL98 169 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 INO80DQ53TQ3 878 aaPredicted RBP7.17□□□□□ -1.26
USP54-206ENST00000433394 ERAP2Q6P179 960 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms