RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 BMT2Q1RMZ1 405 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 TTC7BQ86TV6 843 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 SLC25A41Q8N5S1 370 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CCDC89Q8N998 374 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 C12orf50Q8NA57 414 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 EPS8L1Q8TE68 723 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 DENND1AQ8TEH3 1009 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 GATA6Q92908 595 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CCDC127Q96BQ5 260 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 OPTNQ96CV9 577 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 DMAP1Q9NPF5 467 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 PDP2Q9P2J9 529 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 ACTL7BQ9Y614 415 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 DCCP43146 1447 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 ZMYM2Q9UBW7 1377 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 C2CD2LO14523 706 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 ZWINTO95229 277 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 IFNB1P01574 187 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 AP1B1Q10567 949 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CMPK2Q5EBM0 449 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 ISLR2Q6UXK2 745 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 IFT43Q96FT9 208 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 NAP1L4Q99733 375 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 KRT82Q9NSB4 513 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 TAS2R1Q9NYW7 299 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF148Q9UQR1 794 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 MAGEB2O15479 319 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 TCEA3O75764 348 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 KRT5P13647 590 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CD58P19256 250 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 YY1P25490 414 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 SSTR3P32745 418 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CCNFP41002 786 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 RTP1P59025 263 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 PPP4CP60510 307 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 NR1H3Q13133 447 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 RASA3Q14644 834 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 WDR72Q3MJ13 1102 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 SH3TC2Q8TF17 1288 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 PSPC1Q8WXF1 523 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 PTPRN2Q92932 1015 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 HAUS1Q96CS2 278 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CLPTM1LQ96KA5 538 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 TMEM117Q9H0C3 514 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CHCHD3Q9NX63 227 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 ECE2O60344 883 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 USP1O94782 785 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 UBXN2AP68543 259 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 PLCB3Q01970 1234 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 DEUP1Q05D60 604 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF720Q7Z2F6 126 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 GLIS1Q8NBF1 620 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 ZSWIM2Q8NEG5 633 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 ETNPPLQ8TBG4 499 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 SAR1AQ9NR31 198 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 SMG5Q9UPR3 1016 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 RREB1Q92766 1687 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 B2RBV5 119 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 PI4K2BG5E9Z4 385 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 H3BRJ5 948 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 TRAFD1O14545 582 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 MSH4O15457 936 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 SORBS3O60504 671 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 CYP1A1P04798 512 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 GAP43P17677 238 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 GCAP28676 217 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 VAMP7P51809 220 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 CTC1Q2NKJ3 1217 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 DHX38Q92620 1227 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 FNBP1Q96RU3 617 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 SH2D3AQ9BRG2 576 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 TIPINQ9BVW5 301 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 PREBQ9HCU5 417 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 OLFML3Q9NRN5 406 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 RHBDL2Q9NX52 303 aa12.22□□□□□ -0.45
HMGCS1-202ENST00000433297 ENO1P06733 434 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 POTEJP0CG39 1038 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 NT5C2P49902 561 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 KDSRQ06136 332 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 LMO3Q8TAP4 145 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 TCP10LQ8TDR4 215 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 CPA5Q8WXQ8 436 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 TTC17Q96AE7 1141 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 FAM210AQ96ND0 272 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 MKNK1Q9BUB5 465 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 STX18Q9P2W9 335 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 LNPEPQ9UIQ6 1025 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 FMO1Q01740 532 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 PDIA2Q13087 525 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 GPS1Q13098 491 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms